Rn01416801_m1

Gene Symbol:

LOC103690007 Nsun4

Gene Name:

5-methylcytosine rRNA methyltransferase NSUN4

NOP2/Sun domain family, member 4

Gene Aliases:

-

RGD1559652

Chromosome Location:

Chr.5: 134362953 - 134383688 on Build Rnor_6.0

Chromosome Location:

Chr.5: 134885377 - 134905492 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: LOC103690007
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008763980.1	XP_008762202.1		1865		96

Gene Symbol: Nsun4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001106678.1	NP_001100148.1	5 - 6	971		96

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect transcript(s) from off target gene(s). Please contact Tech Support if you need more information.

• Set Membership: Amplicon length between 86 and 100, 3' Most, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

RNA methyltransferase

Gene Ontology Categories:

Process(es)

biological_process
rRNA methylation
methylation
mature ribosome assembly
positive regulation of mitochondrial translation

Function(s)

molecular_function
methyltransferase activity
small ribosomal subunit rRNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P071914	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P071918	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	364391	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	952855	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	922317	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	516555	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	246998	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	882859	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	652401	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	918871	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	564852	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	64745	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	20785	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	414834	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	671591	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	518485	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	162763	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	142933	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P071913	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P071918	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P071918	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P071913	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P071913	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P071918	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P160349	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	33562	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	73066	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10871178	-	-
Affymetrix Rat Gene 1.0 ST Array	10871175	-	-
Affymetrix Rat Gene 1.0 ST Array	10871174	-	-
Affymetrix Rat Gene 1.0 ST Array	10871180	-	-
Affymetrix Rat Gene 1.0 ST Array	10871179	-	-
Affymetrix Rat Gene 1.0 ST Array	10871181	-	-
Affymetrix Rat Gene 1.0 ST Array	10871176	-	-
Affymetrix Rat Gene 1.1 ST Array	10871173	-	-
Rat Genome 230 2.0 Array	1373509_PM_at	-	-
Rat Genome 230 2.0 Array	1373509_at	-	-
Rat Genome 230 2.0 Array	1380141_at	-	-
Rat Genome 230 2.0 Array	1380141_PM_at	-	-
Affymetrix HT Rat Focus Array	1373509_at	-	-
Affymetrix HT Rat Focus Array	1380141_at	-	-
Affymetrix HT Rat Focus Array	1380141_PM_at	-	-
Affymetrix HT Rat Focus Array	1373509_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500033190.rn.1	TC0500004264.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500033191.rn.1	TC0500004264.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500033192.rn.1	TC0500004264.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500033189.rn.1	TC0500004264.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500033188.rn.1	TC0500004264.rn.1	RTA TC
Rat Expression Set 230	1373509_at	-	-
Rat Expression Set 230	1373509_PM_at	-	-
Rat Expression Set 230	1380141_at	-	-
Rat Expression Set 230	1380141_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10871173	-	-
Rat Genome U34 Set	rc_AA800200_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21447426	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1352671	-	-