Rn01418137_m1 Best Coverage

• Gene Symbol: Clpx
• Gene Name: caseinolytic mitochondrial matrix peptidase chaperone subunit
• Gene Aliases: -
• Chromosome Location: Chr.8: 70789137 - 70843133 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Clpx
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001007803.1	NP_001007804.1	13 - 14	1809		106
	XM_006243250.1	XP_006243312.1	12 - 13	2012		106
GenBank mRNA	BC085867.1	-	13 - 14	1935	7190926	106

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800000937.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Clpx

Panther Classification:

Molecular Function -

protease

Gene Ontology Categories:

Process(es)

protein folding
biological_process
positive regulation of peptidase activity
proteolysis involved in cellular protein catabolic process

Function(s)

molecular_function
ATP-dependent peptidase activity
ATP binding
peptidase activator activity
ATPase activity
metal ion binding
unfolded protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P026339	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	240117	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	665156	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	151431	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	426828	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	37476	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	706259	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	71608	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	259571	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	10405	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	640422	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	786543	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	274395	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	708628	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	3326	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	285834	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	465721	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	241016	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	950674	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	646604	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	735636	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	10159	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	159917	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	481473	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	892212	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	824912	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	753805	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	305387	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	911149	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	851701	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	816155	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	154699	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	101424	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	159913	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	126400	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P026339	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P026339	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P026339	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P16842	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	53128	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	35013	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	4910	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10910952	-	-
Affymetrix Rat Gene 1.0 ST Array	10910938	-	-
Affymetrix Rat Gene 1.0 ST Array	10910948	-	-
Affymetrix Rat Gene 1.0 ST Array	10910940	-	-
Affymetrix Rat Gene 1.0 ST Array	10910946	-	-
Affymetrix Rat Gene 1.0 ST Array	10910945	-	-
Affymetrix Rat Gene 1.0 ST Array	10910939	-	-
Affymetrix Rat Gene 1.0 ST Array	10910949	-	-
Affymetrix Rat Gene 1.0 ST Array	10910944	-	-
Affymetrix Rat Gene 1.0 ST Array	10910947	-	-
Affymetrix Rat Gene 1.0 ST Array	10910950	-	-
Affymetrix Rat Gene 1.0 ST Array	10910941	-	-
Affymetrix Rat Gene 1.0 ST Array	10910943	-	-
Affymetrix Rat Gene 1.0 ST Array	10910937	-	-
Affymetrix Rat Gene 1.0 ST Array	10910942	-	-
Affymetrix Rat Gene 1.0 ST Array	10910951	-	-
Affymetrix Rat Gene 1.1 ST Array	10910936	-	-
Rat Genome 230 2.0 Array	1398698_at	-	-
Rat Genome 230 2.0 Array	1377192_PM_a_at	-	-
Rat Genome 230 2.0 Array	1398698_PM_at	-	-
Rat Genome 230 2.0 Array	1377192_a_at	-	-
Affymetrix HT Rat Focus Array	1377192_PM_a_at	-	-
Affymetrix HT Rat Focus Array	1377192_a_at	-	-
Affymetrix Rat Clariom S Assay	PSR0800006762.rn.1	TC0800000937.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800006760.rn.1	TC0800000937.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800006761.rn.1	TC0800000937.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800006763.rn.1	TC0800000937.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800006758.rn.1	TC0800000937.rn.1	RTA TC
Rat Expression Set 230	1377192_PM_a_at	-	-
Rat Expression Set 230	1377192_a_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10910936	-	-
Rat Genome U34 Set	rc_AI029291_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21540279	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_2040542	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1530376	-	-
RatRef-12 Expression BeadChip	ILMN_63961	-	-
RatRef-12 Expression BeadChip	ILMN_160625	-	-