Rn01420324_g1

• Gene Symbol: Ocel1
• Gene Name: occludin/ELL domain containing 1
• Gene Aliases: RGD1563236, RGD1565407
• Chromosome Location: Chr.16: 19766749 - 19769033 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ocel1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001106065.1	NP_001099535.1	3 - 4	913		68
	XM_006252856.2	XP_006252918.1	2 - 3	1543		68
	XM_008771080.1	XP_008769302.1	2 - 3	1262		68
GenBank mRNA	BC169113.1	-	2 - 3	1005		68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1600000248.rn.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, 1700, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P063014	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P063014	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P063014	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P063014	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P695770	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10787265	-	-
Affymetrix Rat Gene 1.0 ST Array	10812125	-	-
Affymetrix Rat Gene 1.0 ST Array	10787262	-	-
Affymetrix Rat Gene 1.0 ST Array	10812123	-	-
Affymetrix Rat Gene 1.0 ST Array	10787263	-	-
Affymetrix Rat Gene 1.0 ST Array	10812124	-	-
Affymetrix Rat Gene 1.0 ST Array	10787264	-	-
Affymetrix Rat Gene 1.0 ST Array	10812126	-	-
Affymetrix Rat Gene 1.1 ST Array	10812122	-	-
Affymetrix Rat Gene 1.1 ST Array	10787261	-	-
Rat Genome 230 2.0 Array	1399068_PM_at	-	-
Rat Genome 230 2.0 Array	1399068_at	-	-
Rat Genome 230 2.0 Array	1399068_at	-	-
Rat Genome 230 2.0 Array	1399068_PM_at	-	-
Affymetrix HT Rat Focus Array	1399068_PM_at	-	-
Affymetrix HT Rat Focus Array	1399068_at	-	-
Affymetrix Rat Clariom S Assay	PSR1600002432.rn.1	TC1600000248.rn.1	RTA TC
Rat Expression Set 230	1399068_PM_at	-	-
Rat Expression Set 230	1399068_PM_at	-	-
Rat Expression Set 230	1399068_at	-	-
Rat Expression Set 230	1399068_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10812122	-	-
Affymetrix Rat Gene 1.0 ST Array	10787261	-	-
Rat Genome U34 Set	rc_AA955536_g_at	-	-
Rat Genome U34 Set	rc_AA955536_at	-	-
Rat Genome U34 Set	rc_AA955536_g_at	-	-
Rat Genome U34 Set	rc_AA955536_at	-	-
Rat Genome U34 Set	rc_AI011833_at	-	-
Rat Genome U34 Set	rc_AA819502_at	-	-
Rat Genome U34 Set	rc_AA819502_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21537752	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_2039260	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_2039010	-	-