Rn01421181_m1 Best Coverage

• Gene Symbol: Isy1
• Gene Name: ISY1 splicing factor homolog (S. cerevisiae)
• Gene Aliases: Isy1-rab43, RGD1307688
• Chromosome Location: Chr.4: 119721659 - 119742349 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Isy1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001014188.1	NP_001014210.1	5 - 6	271		122
GenBank mRNA	BC079119.1	-	5 - 6	271	7126525	122
	FQ218201.1	-	5 - 6	322		122

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400003275.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Isy1

Panther Classification:

Molecular Function -

RNA metabolism protein, RNA processing factor, RNA splicing factor, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

mRNA processing
RNA splicing

Function(s)

poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P102410	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P958650	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	703492	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	736377	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	581676	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	95676	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	744425	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	417429	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	597485	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	654283	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	933157	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	892968	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	21002	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	178531	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	102265	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P102410	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P958650	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P958650	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P102410	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P958650	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P102410	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P958650	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P467057	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P16724	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	1790	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	34035	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10863859	-	-
Affymetrix Rat Gene 1.0 ST Array	10863864	-	-
Affymetrix Rat Gene 1.0 ST Array	10863863	-	-
Affymetrix Rat Gene 1.0 ST Array	10863862	-	-
Affymetrix Rat Gene 1.0 ST Array	10863860	-	-
Affymetrix Rat Gene 1.0 ST Array	10863865	-	-
Affymetrix Rat Gene 1.0 ST Array	10863861	-	-
Affymetrix Rat Gene 1.0 ST Array	10863858	-	-
Affymetrix Rat Gene 1.1 ST Array	10863857	-	-
Rat Genome 230 2.0 Array	1383596_PM_at	-	-
Rat Genome 230 2.0 Array	1378933_at	-	-
Rat Genome 230 2.0 Array	1383596_at	-	-
Rat Genome 230 2.0 Array	1378933_PM_at	-	-
Rat Genome 230 2.0 Array	1377756_PM_at	-	-
Rat Genome 230 2.0 Array	1377756_at	-	-
Affymetrix HT Rat Focus Array	1378933_PM_at	-	-
Affymetrix HT Rat Focus Array	1378933_at	-	-
Affymetrix HT Rat Focus Array	1383596_PM_at	-	-
Affymetrix HT Rat Focus Array	1377756_at	-	-
Affymetrix HT Rat Focus Array	1377756_PM_at	-	-
Affymetrix HT Rat Focus Array	1383596_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400023313.rn.1	TC0400003275.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400023310.rn.1	TC0400003275.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400023311.rn.1	TC0400003275.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400023308.rn.1	TC0400003275.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400023312.rn.1	TC0400003275.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400023316.rn.1	TC0400003275.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400023314.rn.1	TC0400003275.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400023309.rn.1	TC0400003275.rn.1	RTA TC
Rat Expression Set 230	1377756_PM_at	-	-
Rat Expression Set 230	1377756_at	-	-
Rat Expression Set 230	1378933_PM_at	-	-
Rat Expression Set 230	1378933_at	-	-
Rat Expression Set 230	1383596_PM_at	-	-
Rat Expression Set 230	1383596_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10863857	-	-
Rat Genome U34 Set	rc_AA957338_at	-	-
Rat Genome U34 Set	rc_AA817909_at	-	-
Rat Genome U34 Set	rc_AI136869_at	-	-
Rat Genome U34 Set	rc_AI232228_at	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1364217	-	-