Rn01422002_g1

• Gene Symbol: Apoc3
• Gene Name: apolipoprotein C-III
• Gene Aliases: ApoC-III, apo-CIII
• Chromosome Location: Chr.8: 50529318 - 50531533 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Apoc3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012501.2	NP_036633.2	1 - 2	75		78
	XM_008766144.1	XP_008764366.1	1 - 2	110		78
GenBank mRNA	FQ209522.1	-	1 - 2	42		78
	FQ209891.1	-	1 - 2	44		78
	FQ210075.1	-	1 - 2	75		78
	FQ210160.1	-	1 - 2	44		78
	FQ210397.1	-	1 - 2	42		78
	FQ210428.1	-	1 - 2	46		78
	FQ210554.1	-	1 - 2			78
	FQ210884.1	-	1 - 2	41		78
	FQ211165.1	-	1 - 2	42		78
	FQ211318.1	-	1 - 2	44		78
	FQ211343.1	-	1 - 2	44		78
	FQ211392.1	-	1 - 2	46		78
	FQ211416.1	-	1 - 2	47		78
	FQ211454.1	-	1 - 2	46		78
	FQ218088.1	-	1 - 2	74		78
	FQ218207.1	-	1 - 2	74		78
	FQ218286.1	-	1 - 2	45		78
	FQ219230.1	-	1 - 2	42		78

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800002454.rn.1

Additional Information:

This assay is in the 5'UTR region of the NM_012501.2,XM_008766144.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Transporter, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apoc3

Panther Classification:

Molecular Function -

apolipoprotein

Gene Ontology Categories:

Process(es)

triglyceride metabolic process
triglyceride mobilization
lipid transport
inflammatory response
G-protein coupled receptor signaling pathway
response to nutrient
cholesterol metabolic process
negative regulation of triglyceride catabolic process
negative regulation of very-low-density lipoprotein particle remodeling
negative regulation of very-low-density lipoprotein particle clearance
negative regulation of high-density lipoprotein particle clearance
negative regulation of low-density lipoprotein particle clearance
triglyceride catabolic process
regulation of Cdc42 protein signal transduction
cholesterol efflux
phospholipid efflux
high-density lipoprotein particle remodeling
chylomicron remnant clearance
lipoprotein metabolic process
response to drug
cholesterol homeostasis
lipoprotein transport
response to peptide hormone
negative regulation of fatty acid biosynthetic process
negative regulation of lipid metabolic process
negative regulation of receptor-mediated endocytosis
negative regulation of lipid catabolic process
negative regulation of lipoprotein lipase activity
negative regulation of cholesterol import
triglyceride homeostasis
cellular response to glucose stimulus

Function(s)

lipid transporter activity
phospholipid binding
enzyme regulator activity
lipase inhibitor activity
high-density lipoprotein particle receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0800019792.rn.1	TC0800002454.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0800019788.rn.1	TC0800002454.rn.1	RTA TC