Rn01423343_m1 Best Coverage

• Gene Symbol: Pltp
• Gene Name: phospholipid transfer protein
• Gene Aliases: Bpife
• Chromosome Location: Chr.3: 161304469 - 161322600 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pltp
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001168543.1	NP_001162015.1	7 - 8	865		87
	XM_006235535.2	XP_006235597.1	8 - 9	923		87
	XM_008762476.1	XP_008760698.1	8 - 9	917		87

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300004761.rn.1

• Set Membership: Amplicon length between 86 and 100, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

lipid metabolic process
biological_process
vitamin E biosynthetic process
positive regulation of cholesterol efflux
sperm motility
high-density lipoprotein particle remodeling

Function(s)

molecular_function
lipid binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P436280	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P436280	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P436280	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P436280	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P436280	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P488690	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.1 ST Array	10842203	-	-
Affymetrix Rat Gene 1.1 ST Array	10851670	-	-
Rat Genome 230 2.0 Array	1391435_PM_at	-	-
Rat Genome 230 2.0 Array	1382771_at	-	-
Rat Genome 230 2.0 Array	1382771_PM_at	-	-
Rat Genome 230 2.0 Array	1391435_at	-	-
Affymetrix HT Rat Focus Array	1382771_PM_at	-	-
Affymetrix HT Rat Focus Array	1391435_PM_at	-	-
Affymetrix HT Rat Focus Array	1391435_at	-	-
Affymetrix HT Rat Focus Array	1382771_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300036453.rn.1	TC0300004761.rn.1	RTA TC
Rat Expression Set 230	1382771_PM_at	-	-
Rat Expression Set 230	1382771_at	-	-
Rat Expression Set 230	1391435_PM_at	-	-
Rat Expression Set 230	1391435_at	-	-
Rat Genome U34 Set	rc_AI171583_at	-	-
Rat Genome U34 Set	rc_AI230465_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21866259	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1361441	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376575	-	-