Rn01423685_m1 Best Coverage

• Gene Symbol: Ptpn1
• Gene Name: protein tyrosine phosphatase, non-receptor type 1
• Gene Aliases: Ptp
• Chromosome Location: Chr.3: 164665462 - 164714641 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ptpn1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012637.2	NP_036769.1	5 - 6	566		71
	XM_006235638.2	XP_006235700.1	5 - 6	635		71
	XM_006235639.2	XP_006235701.1	5 - 6	636		71
GenBank mRNA	BC081829.1	-	5 - 6	566	7135855	71
	M33962.1	-	5 - 6	608		71

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300002381.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Protein Phosphatase, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ptpn1

Panther Classification:

Molecular Function -

protein phosphatase

Gene Ontology Categories:

Process(es)

protein dephosphorylation
insulin receptor signaling pathway
regulation of signal transduction
regulation of endocytosis
negative regulation of vascular endothelial growth factor receptor signaling pathway
endoplasmic reticulum unfolded protein response
actin cytoskeleton reorganization
peptidyl-tyrosine dephosphorylation
platelet-derived growth factor receptor-beta signaling pathway
regulation of insulin receptor signaling pathway
negative regulation of ERK1 and ERK2 cascade
regulation of hepatocyte growth factor receptor signaling pathway
peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity

Function(s)

protein tyrosine phosphatase activity
insulin receptor binding
protein binding
zinc ion binding
enzyme binding
protein kinase binding
receptor tyrosine kinase binding
poly(A) RNA binding
ephrin receptor binding
protein phosphatase 2A binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P132432	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P132437	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	433536	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	724606	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	854083	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	500163	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	338874	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	255354	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	263530	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	227306	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	720293	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	673813	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	670402	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	167605	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	238610	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	704415	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	573450	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	232573	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	244493	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	450737	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	25787	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	268179	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	491277	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	217391	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	544320	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	814402	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	588409	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	121494	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	714101	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	519591	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	424831	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	46060	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	863234	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	591622	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	321928	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	301543	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	105195	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	138222	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	97352	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	117891	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	42449	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P132432	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P132437	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P132437	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P132432	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P132437	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P132432	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P519834	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P11497	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700493485	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700513145	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	63770	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	44484	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	96626	-	-
Agilent Rat cDNA Microarray (G4105A)	700493485	-	-
Agilent Rat cDNA Microarray (G4105A)	700513145	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10842476	-	-
Affymetrix Rat Gene 1.0 ST Array	10842482	-	-
Affymetrix Rat Gene 1.0 ST Array	10842484	-	-
Affymetrix Rat Gene 1.0 ST Array	10842480	-	-
Affymetrix Rat Gene 1.0 ST Array	10842483	-	-
Affymetrix Rat Gene 1.0 ST Array	10842479	-	-
Affymetrix Rat Gene 1.0 ST Array	10842485	-	-
Affymetrix Rat Gene 1.0 ST Array	10842481	-	-
Affymetrix Rat Gene 1.0 ST Array	10842477	-	-
Affymetrix Rat Gene 1.0 ST Array	10842478	-	-
Affymetrix Rat Gene 1.1 ST Array	10842475	-	-
Rat Genome 230 2.0 Array	1397916_s_at	-	-
Rat Genome 230 2.0 Array	1368645_PM_at	-	-
Rat Genome 230 2.0 Array	1397916_PM_s_at	-	-
Rat Genome 230 2.0 Array	1368645_at	-	-
Affymetrix HT Rat Focus Array	1368645_at	-	-
Affymetrix HT Rat Focus Array	1368645_PM_at	-	-
Affymetrix HT Rat Focus Array	1397916_PM_s_at	-	-
Affymetrix HT Rat Focus Array	1397916_s_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300017799.rn.1	TC0300002381.rn.1	RTA TC
Rat Expression Set 230	1368645_PM_at	-	-
Rat Expression Set 230	1368645_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10842475	-	-
Rat Genome U34 Set	M33962_at	-	-
Rat Genome U34 Set	M33962_g_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22345955	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1355065	-	-
RatRef-12 Expression BeadChip	ILMN_70340	-	-