Rn01424853_m1 Best Coverage

• Gene Symbol: Nubp1
• Gene Name: nucleotide binding protein 1
• Gene Aliases: -
• Chromosome Location: Chr.10: 5333378 - 5343949 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nubp1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001009619.1	NP_001009619.1	9 - 10	842		89
GenBank mRNA	BC088221.1	-	9 - 10	842	7321552	89
	FQ214074.1	-	8 - 9	786		89
	FQ218444.1	-	9 - 10	855		89
	FQ220638.1	-	9 - 10	855		89
	FQ222868.1	-	9 - 10	859		89

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000002214.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nubp1

Gene Ontology Categories:

Process(es)

cellular iron ion homeostasis
negative regulation of centrosome duplication
cell growth
iron-sulfur cluster assembly
centrosome localization
protein localization to cell cortex

Function(s)

ATP binding
metal ion binding
iron-sulfur cluster binding
4 iron, 4 sulfur cluster binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P163018	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	234932	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	240884	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	871785	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	885329	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	37121	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	572914	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	576506	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	92590	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	118769	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	51495	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P163018	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P163018	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P163018	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P163018	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	92931	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10740468	-	-
Affymetrix Rat Gene 1.0 ST Array	10740467	-	-
Affymetrix Rat Gene 1.0 ST Array	10740469	-	-
Affymetrix Rat Gene 1.0 ST Array	10740475	-	-
Affymetrix Rat Gene 1.0 ST Array	10740476	-	-
Affymetrix Rat Gene 1.0 ST Array	10740473	-	-
Affymetrix Rat Gene 1.0 ST Array	10740474	-	-
Affymetrix Rat Gene 1.0 ST Array	10740472	-	-
Affymetrix Rat Gene 1.0 ST Array	10740471	-	-
Affymetrix Rat Gene 1.0 ST Array	10740470	-	-
Affymetrix Rat Gene 1.1 ST Array	10740466	-	-
Rat Genome 230 2.0 Array	1385280_PM_at	-	-
Rat Genome 230 2.0 Array	1385280_at	-	-
Rat Genome 230 2.0 Array	1371503_PM_at	-	-
Rat Genome 230 2.0 Array	1384749_at	-	-
Rat Genome 230 2.0 Array	1371503_at	-	-
Rat Genome 230 2.0 Array	1384749_PM_at	-	-
Affymetrix HT Rat Focus Array	1371503_PM_at	-	-
Affymetrix HT Rat Focus Array	1384749_PM_at	-	-
Affymetrix HT Rat Focus Array	1371503_at	-	-
Affymetrix HT Rat Focus Array	1384749_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000019919.rn.1	TC1000002214.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000019918.rn.1	TC1000002214.rn.1	RTA TC
Rat Expression Set 230	1371503_at	-	-
Rat Expression Set 230	1371503_PM_at	-	-
Rat Expression Set 230	1384749_at	-	-
Rat Expression Set 230	1384749_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10740466	-	-
Rat Genome U34 Set	rc_AA819729_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21135964	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1370607	-	-
RatRef-12 Expression BeadChip	ILMN_64137	-	-