Rn01425426_m1

Gene Symbol:

Tprkb LOC103690067

Gene Name:

Tp53rk binding protein

EKC/KEOPS complex subunit Tprkb

Gene Aliases:

Cgi-121, RGD1309786

-

Chromosome Location:

Chr.4: 117589566 - 117604481 on Build Rnor_6.0

Chromosome Location:

Chr.4: 117772553 - 117787465 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: Tprkb
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001013926.2	NP_001013948.2	3 - 4	391		129
	XM_003749789.3	XP_003749837.1	3 - 4	342		129
	XM_006236804.2	XP_006236866.1	4 - 5	1048		129
	XM_006236805.2	XP_006236867.1	4 - 5	543		129
	XM_006236808.2	XP_006236870.1	4 - 5	413		129
	XM_008763062.1	XP_008761284.1	5 - 6	1085		129
GenBank mRNA	BC087060.1	-	4 - 5	406		129
	CK475733.1	-	3 - 4	391		129
	CV112449.1	-	3 - 4	319		129
	FQ234910.1	-	3 - 4	348		129

Gene Symbol: LOC103690067
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_006236742.2	XP_006236804.1		1048		129
	XM_006236743.2	XP_006236805.1		543		129
	XM_006236745.2	XP_006236807.1		413		129
	XM_006236746.2	XP_006236808.1		327		129
	XM_008763108.1	XP_008761330.1		427		129
	XM_008763109.1	XP_008761331.1		1085		129

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400001299.rn.1, TC0400001306.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tprkb
Click here to find siRNAs for Gene LOC103690067

Gene Ontology Categories:

Process(es)

tRNA processing

Function(s)

protein kinase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P295361	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	30793	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	732040	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	620051	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	163751	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	97275	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	253970	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	25717	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P295361	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P295361	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P295361	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P295361	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	48026	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	22929	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10856916	-	-
Affymetrix Rat Gene 1.0 ST Array	10856918	-	-
Affymetrix Rat Gene 1.0 ST Array	10856919	-	-
Affymetrix Rat Gene 1.0 ST Array	10856915	-	-
Affymetrix Rat Gene 1.0 ST Array	10856920	-	-
Affymetrix Rat Gene 1.0 ST Array	10856921	-	-
Affymetrix Rat Gene 1.0 ST Array	10856917	-	-
Affymetrix Rat Gene 1.1 ST Array	10856914	-	-
Rat Genome 230 2.0 Array	1390972_PM_at	-	-
Rat Genome 230 2.0 Array	1376007_at	-	-
Rat Genome 230 2.0 Array	1390972_at	-	-
Rat Genome 230 2.0 Array	1382014_PM_at	-	-
Rat Genome 230 2.0 Array	1382014_at	-	-
Rat Genome 230 2.0 Array	1376007_PM_at	-	-
Affymetrix HT Rat Focus Array	1390972_PM_at	-	-
Affymetrix HT Rat Focus Array	1382014_at	-	-
Affymetrix HT Rat Focus Array	1390972_at	-	-
Affymetrix HT Rat Focus Array	1382014_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400009213.rn.1	TC0400001299.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400009214.rn.1	TC0400001299.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400009215.rn.1	TC0400001299.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400009275.rn.1	TC0400001306.rn.1	RTA TC
Rat Expression Set 230	1382014_at	-	-
Rat Expression Set 230	1390972_at	-	-
Rat Expression Set 230	1390972_PM_at	-	-
Rat Expression Set 230	1382014_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10856914	-	-
Rat Genome U34 Set	rc_AA819730_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21179999	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1369876	-	-