Rn01426808_m1 Best Coverage

• Gene Symbol: Usp10
• Gene Name: ubiquitin specific peptidase 10
• Gene Aliases: -
• Chromosome Location: Chr.19: 52566277 - 52608820 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Usp10
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001034146.1	NP_001029318.1	12 - 13	2216		111
	XM_008772609.1	XP_008770831.1	12 - 13	2549		111
	XM_008772610.1	XP_008770832.1	12 - 13	2544		111
GenBank mRNA	BC105892.1	-	12 - 13	2216	7367339	111

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1900000720.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Protease, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Usp10

Gene Ontology Categories:

Process(es)

DNA repair
autophagy
regulation of autophagy
protein deubiquitination
DNA damage response, signal transduction by p53 class mediator
proteasome-mediated ubiquitin-dependent protein catabolic process
regulation of proteasomal protein catabolic process

Function(s)

p53 binding
cysteine-type endopeptidase activity
thiol-dependent ubiquitin-specific protease activity
ion channel binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P157029	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	756511	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	434526	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	34083	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	326004	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	273585	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	914913	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	660679	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	142378	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	829839	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	773494	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	697141	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	599995	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	576428	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	10410	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	321695	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	203542	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	732501	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	1855	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	208123	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	633927	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	614985	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	607733	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	1270	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	139758	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	522619	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	724323	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	968186	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	20519	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	156834	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	6043	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	75347	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	39038	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P157029	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P157029	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P157029	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P206258	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1071355	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	69336	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	42411	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	86146	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10808376	-	-
Affymetrix Rat Gene 1.0 ST Array	10808366	-	-
Affymetrix Rat Gene 1.0 ST Array	10808371	-	-
Affymetrix Rat Gene 1.0 ST Array	10808364	-	-
Affymetrix Rat Gene 1.0 ST Array	10808370	-	-
Affymetrix Rat Gene 1.0 ST Array	10808369	-	-
Affymetrix Rat Gene 1.0 ST Array	10808374	-	-
Affymetrix Rat Gene 1.0 ST Array	10808365	-	-
Affymetrix Rat Gene 1.0 ST Array	10808375	-	-
Affymetrix Rat Gene 1.0 ST Array	10808363	-	-
Affymetrix Rat Gene 1.0 ST Array	10808368	-	-
Affymetrix Rat Gene 1.0 ST Array	10808367	-	-
Affymetrix Rat Gene 1.0 ST Array	10808373	-	-
Affymetrix Rat Gene 1.0 ST Array	10808372	-	-
Affymetrix Rat Gene 1.1 ST Array	10808362	-	-
Rat Genome 230 2.0 Array	1372150_at	-	-
Rat Genome 230 2.0 Array	1398453_at	-	-
Rat Genome 230 2.0 Array	1398453_PM_at	-	-
Rat Genome 230 2.0 Array	1372150_PM_at	-	-
Affymetrix HT Rat Focus Array	1372150_at	-	-
Affymetrix HT Rat Focus Array	1372150_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1900006002.rn.1	TC1900000720.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1900006001.rn.1	TC1900000720.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1900006003.rn.1	TC1900000720.rn.1	RTA TC
Rat Expression Set 230	1372150_at	-	-
Rat Expression Set 230	1372150_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10808362	-	-
Rat Genome U34 Set	rc_AA859327_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21411310	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1369663	-	-