Rn01428192_m1 Best Coverage

• Gene Symbol: Tet1
• Gene Name: tet methylcytosine dioxygenase 1
• Gene Aliases: Cxxc6
• Chromosome Location: Chr.20: 27359125 - 27438039 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tet1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_006256398.2	XP_006256460.1	10 - 11	5221		66

More Information

• Set Membership: Amplicon length less than or equal to 70, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

inner cell mass cell differentiation
protein O-linked glycosylation
biological_process
stem cell population maintenance
regulation of DNA methylation
positive regulation of transcription from RNA polymerase II promoter
oxidation-reduction process
DNA demethylation
negative regulation of methylation-dependent chromatin silencing
regulation of genetic imprinting

Function(s)

molecular_function
DNA binding
iron ion binding
zinc ion binding
structure-specific DNA binding
methylcytosine dioxygenase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P086073	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	172325	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	190069	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	144847	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	645251	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	169715	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	189072	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	822828	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	191669	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	386093	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	57684	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	153383	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	813075	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	314061	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	896964	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	707761	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	634914	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	596682	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	47162	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	82220	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	20646	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	111277	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P086073	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P086073	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P086073	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P466577	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10832852	-	-
Affymetrix Rat Gene 1.0 ST Array	10832857	-	-
Affymetrix Rat Gene 1.0 ST Array	10832855	-	-
Affymetrix Rat Gene 1.0 ST Array	10832849	-	-
Affymetrix Rat Gene 1.0 ST Array	10832848	-	-
Affymetrix Rat Gene 1.0 ST Array	10832851	-	-
Affymetrix Rat Gene 1.0 ST Array	10832853	-	-
Affymetrix Rat Gene 1.0 ST Array	10832856	-	-
Affymetrix Rat Gene 1.0 ST Array	10832858	-	-
Affymetrix Rat Gene 1.1 ST Array	10832847	-	-
Affymetrix Rat Gene 1.0 ST Array	10832847	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20995633	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1365132	-	-