Rn01429469_m1 Best Coverage

• Gene Symbol: Dnmt3l
• Gene Name: DNA (cytosine-5-)-methyltransferase 3-like
• Gene Aliases: -
• Chromosome Location: Chr.20: 11344513 - 11359090 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Dnmt3l
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001003964.1	NP_001003964.1	12 - 13	1241		85
	XM_006256250.2	XP_006256312.1	11 - 12	1264		85
	XM_006256251.2	XP_006256313.1	3 - 4	636		85

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000001287.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Dnmt3l

Panther Classification:

Molecular Function -

DNA methyltransferase

Gene Ontology Categories:

Process(es)

in utero embryonic development
placenta development
methylation
positive regulation of catalytic activity
response to ethanol
negative regulation of transcription, DNA-templated
chorionic trophoblast cell differentiation
genetic imprinting

Function(s)

enzyme activator activity
enzyme binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P001461	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	40845	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	5081	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	492655	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	837716	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	38142	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	240477	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	407524	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	5249	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	403584	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	58991	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P001461	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P001461	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P001461	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P515281	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	39503	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10832247	-	-
Affymetrix Rat Gene 1.0 ST Array	10832242	-	-
Affymetrix Rat Gene 1.0 ST Array	10832244	-	-
Affymetrix Rat Gene 1.0 ST Array	10832252	-	-
Affymetrix Rat Gene 1.0 ST Array	10832246	-	-
Affymetrix Rat Gene 1.0 ST Array	10832243	-	-
Affymetrix Rat Gene 1.0 ST Array	10832245	-	-
Affymetrix Rat Gene 1.0 ST Array	10832251	-	-
Affymetrix Rat Gene 1.0 ST Array	10832249	-	-
Affymetrix Rat Gene 1.0 ST Array	10832241	-	-
Affymetrix Rat Gene 1.0 ST Array	10832248	-	-
Affymetrix Rat Gene 1.0 ST Array	10832240	-	-
Affymetrix Rat Gene 1.1 ST Array	10832239	-	-
Affymetrix Rat Clariom S Assay	PSR2000010620.rn.1	TC2000001287.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000010621.rn.1	TC2000001287.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10832239	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21897177	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376468	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_2039366	-	-