Rn01433678_m1 Best Coverage

• Gene Symbol: Pcbd1
• Gene Name: pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha
• Gene Aliases: DCoH, Pcbd, Pcd, Phs, TCF1
• Chromosome Location: Chr.20: 30689690 - 30696465 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pcbd1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001007601.2	NP_001007602.1	3 - 4	254		90
	XM_006256414.1	XP_006256476.1	4 - 5	512		90
GenBank mRNA	DV724713.1	-	1 - 2	63		90
	FM060466.1	-	3 - 4	254		90
	FM067129.1	-	3 - 4	231		90
	M83740.1	-	3 - 4	450		90

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000672.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pcbd1

Panther Classification:

Molecular Function -

dehydratase

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
L-phenylalanine metabolic process
tetrahydrobiopterin biosynthetic process
biological_process
regulation of protein homodimerization activity
positive regulation of transcription, DNA-templated
protein homotetramerization
protein heterooligomerization
oxidation-reduction process

Function(s)

molecular_function
transcription coactivator activity
phenylalanine 4-monooxygenase activity
4-alpha-hydroxytetrahydrobiopterin dehydratase activity
identical protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P039414	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P039409	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	628905	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	771752	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	501573	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	613859	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	27184	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P039414	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P039409	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P039409	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P039414	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P039414	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P039409	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P555107	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	36748	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10830005	-	-
Affymetrix Rat Gene 1.0 ST Array	10830006	-	-
Affymetrix Rat Gene 1.0 ST Array	10830004	-	-
Affymetrix Rat Gene 1.0 ST Array	10830007	-	-
Affymetrix Rat Gene 1.1 ST Array	10830003	-	-
Rat Genome 230 2.0 Array	1372485_at	-	-
Rat Genome 230 2.0 Array	1372485_PM_at	-	-
Affymetrix HT Rat Focus Array	1372485_at	-	-
Affymetrix HT Rat Focus Array	1372485_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR2000005912.rn.1	TC2000000672.rn.1	RTA TC
Rat Expression Set 230	1372485_at	-	-
Rat Expression Set 230	1372485_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10830003	-	-
Rat Genome U34 Set	M83740_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20873850	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1358139	-	-
RatRef-12 Expression BeadChip	ILMN_55727	-	-