Rn01433702_m1

• Gene Symbol: Lims1
• Gene Name: LIM and senescent cell antigen-like domains 1
• Gene Aliases: Pinch1, RGD1560732
• Chromosome Location: Chr.20: 27895983 - 28004767 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Lims1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001145456.1	NP_001138928.1	3 - 4	392		126
	XM_006256385.2	XP_006256447.1	3 - 4	2294		126
	XM_006256386.2	XP_006256448.1	3 - 4	2294		126
	XM_006256387.2	XP_006256449.1	3 - 4	2291		126
	XM_006256388.2	XP_006256450.1	3 - 4	2158		126
	XM_006256389.2	XP_006256451.1	3 - 4	385		126
	XM_006256390.2	XP_006256452.1	3 - 4	1965		126
	XM_006256391.2	XP_006256453.1	3 - 4	1964		126
GenBank mRNA	FJ640984.1	-	3 - 4	392		126
	FJ640985.1	-	3 - 4	471		126
	FQ222665.1	-	3 - 4	480		126

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000629.rn.1

• Set Membership: Amplicon length greater than or equal to 101, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

cell junction protein

Gene Ontology Categories:

Process(es)

epithelial to mesenchymal transition
cell-matrix adhesion
establishment or maintenance of cell polarity
positive regulation of gene expression
positive regulation of cell-substrate adhesion
single organismal cell-cell adhesion
chordate embryonic development
negative regulation of apoptotic process
positive regulation of GTPase activity
establishment of protein localization
cell-cell junction organization
negative regulation of transcription, DNA-templated
regulation of epithelial cell proliferation
negative regulation of epithelial cell proliferation
protein heterooligomerization
positive regulation of focal adhesion assembly
cellular response to transforming growth factor beta stimulus
positive regulation of substrate adhesion-dependent cell spreading
negative regulation of neural precursor cell proliferation
negative regulation of hepatocyte proliferation
positive regulation of integrin-mediated signaling pathway

Function(s)

zinc ion binding
protein kinase binding
protein domain specific binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR2000005533.rn.1	TC2000000629.rn.1	RTA TC