Rn01434315_m1 Best Coverage

• Gene Symbol: Commd1
• Gene Name: copper metabolism (Murr1) domain containing 1
• Gene Aliases: -
• Chromosome Location: Chr.14: 107664321 - 107759974 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Commd1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001115022.1	NP_001108494.1	1 - 2	322		86
GenBank mRNA	BC158752.1	-	1 - 2	309	9102854	86

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400002359.rn.1

• Set Membership: Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

Golgi to plasma membrane transport
positive regulation of protein ubiquitination
protein destabilization
negative regulation of NF-kappaB transcription factor activity
regulation of proteasomal ubiquitin-dependent protein catabolic process
plasma membrane to endosome transport
copper ion homeostasis
negative regulation of hypoxia-inducible factor-1alpha signaling pathway
negative regulation of sodium ion transmembrane transport
negative regulation of protein localization to cell surface

Function(s)

copper ion binding
phosphatidylinositol-4,5-bisphosphate binding
phosphatidylinositol-3,4,5-trisphosphate binding
identical protein binding
protein homodimerization activity
phosphatidylinositol-3,4-bisphosphate binding
phosphatidic acid binding
phosphatidylinositol-3,5-bisphosphate binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1400017454.rn.1	TC1400002359.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400017457.rn.1	TC1400002359.rn.1	RTA TC