Rn01434769_m1 Best Coverage

• Gene Symbol: Ptpdc1
• Gene Name: protein tyrosine phosphatase domain containing 1
• Gene Aliases: -
• Chromosome Location: Chr.17: 16333415 - 16381887 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ptpdc1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001106104.1	NP_001099574.1	3 - 4	522		60
	XM_006253700.2	XP_006253762.1	2 - 3	1345		60
	XM_006253701.2	XP_006253763.1	3 - 4	1042		60

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1700000290.rn.1

• Set Membership: Amplicon length less than or equal to 70, Recommended Assay, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

smoothened signaling pathway
peptidyl-tyrosine dephosphorylation
cilium assembly

Function(s)

protein tyrosine phosphatase activity
protein tyrosine/serine/threonine phosphatase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1700002332.rn.1	TC1700000290.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1700002325.rn.1	TC1700000290.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1700002329.rn.1	TC1700000290.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1700002321.rn.1	TC1700000290.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1700002331.rn.1	TC1700000290.rn.1	RTA TC