Rn01439516_g1

• Gene Symbol: Vcp
• Gene Name: valosin-containing protein
• Gene Aliases: -
• Chromosome Location: Chr.5: 58426548 - 58445953 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Vcp
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053864.2	NP_446316.1	11 - 12	1570		100
GenBank mRNA	BC060518.1	-	11 - 12	1570	5597843	100
	U11760.1	-	11 - 12	1602		100

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500002599.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vcp

Gene Ontology Categories:

Process(es)

double-strand break repair
ubiquitin-dependent protein catabolic process
ER to Golgi vesicle-mediated transport
activation of cysteine-type endopeptidase activity involved in apoptotic process
cellular response to DNA damage stimulus
protein ubiquitination
protein N-linked glycosylation via asparagine
translesion synthesis
ER-associated ubiquitin-dependent protein catabolic process
retrograde protein transport, ER to cytosol
positive regulation of protein complex assembly
positive regulation of proteasomal ubiquitin-dependent protein catabolic process
protein hexamerization
positive regulation of protein catabolic process
protein homooligomerization
aggresome assembly
positive regulation of protein K63-linked deubiquitination
positive regulation of Lys63-specific deubiquitinase activity

Function(s)

receptor binding
protein binding
ATP binding
lipid binding
ATPase activity
protein phosphatase binding
protein domain specific binding
polyubiquitin binding
protein complex binding
deubiquitinase activator activity
identical protein binding
ADP binding
poly(A) RNA binding
ubiquitin-specific protease binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0500019222.rn.1	TC0500002599.rn.1	RTA TC