Rn01441523_m1 Best Coverage

• Gene Symbol: Hs6st1
• Gene Name: heparan sulfate 6-O-sulfotransferase 1
• Gene Aliases: -
• Chromosome Location: Chr.9: 42620006 - 42659184 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hs6st1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108210.1	NP_001101680.1	1 - 2	341		104

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900000469.rn.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

angiogenesis
heparan sulfate proteoglycan biosynthetic process
heparan sulfate proteoglycan biosynthetic process, enzymatic modification
lung alveolus development
neuron development
labyrinthine layer blood vessel development

Function(s)

heparan sulfate 6-O-sulfotransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P145970	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P046353	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	688951	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	87894	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	834932	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	877468	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	547100	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	489605	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	242974	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	118591	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	164680	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	136564	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	457965	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	208091	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	188240	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	624000	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	85815	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	462543	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	480178	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	395237	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	466133	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	348854	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	579541	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	221597	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	650285	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	173865	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	776446	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	121326	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	167517	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	641877	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	164795	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	901206	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	722219	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	11594	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	87734	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	157629	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	83929	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P046353	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P145970	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P145970	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P046353	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P145970	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P046353	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P20311	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	55	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10922491	-	-
Affymetrix Rat Gene 1.0 ST Array	10922490	-	-
Affymetrix Rat Gene 1.1 ST Array	10922489	-	-
Rat Genome 230 2.0 Array	1372467_PM_at	-	-
Rat Genome 230 2.0 Array	1372467_at	-	-
Affymetrix HT Rat Focus Array	1372467_PM_at	-	-
Affymetrix HT Rat Focus Array	1372467_at	-	-
Affymetrix Rat Clariom S Assay	PSR0900003626.rn.1	TC0900000469.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900003627.rn.1	TC0900000469.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900003625.rn.1	TC0900000469.rn.1	RTA TC
Rat Expression Set 230	1372467_at	-	-
Rat Expression Set 230	1372467_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10922489	-	-
Rat Genome U34 Set	rc_AA943794_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21484332	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1358565	-	-