Rn01442245_g1 Best Coverage

• Gene Symbol: Atg9b
• Gene Name: autophagy related 9B
• Gene Aliases: RGD1560887
• Chromosome Location: Chr.4: 7314369 - 7321239 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Atg9b
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001191968.1	NP_001178897.1	7 - 8	1881		61
	XM_006235960.2	XP_006236022.1	7 - 8	1881		61

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400000112.rn.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

autophagosome assembly
mitophagy
autophagy
protein localization to pre-autophagosomal structure
piecemeal microautophagy of nucleus
late nucleophagy

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P157924	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P157924	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P157924	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P157924	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0400000821.rn.1	TC0400000112.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400000820.rn.1	TC0400000112.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400000823.rn.1	TC0400000112.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400000822.rn.1	TC0400000112.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400000819.rn.1	TC0400000112.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400000824.rn.1	TC0400000112.rn.1	RTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21347847	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1360109	-	-
RatRef-12 Expression BeadChip	ILMN_52361	-	-