Rn01442639_m1

Gene Symbol:

NEWGENE_2301 Cd36

Gene Name:

CD36 molecule (thrombospondin receptor)

CD36 molecule (thrombospondin receptor)

Gene Aliases:

Cd36

Fat

Chromosome Location:

Chr.4: 14001684 - 14071162 on Build Rnor_6.0

Chromosome Location:

Chr.4: 14150309 - 14191498 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: NEWGENE_2301
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
GenBank mRNA	EF116601.1	-	1 - 2	72		112

Gene Symbol: Cd36
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031561.2	NP_113749.2		39		112
GenBank mRNA	BC072543.1	-		39		112

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400000195.rn.1

Additional Information:

This assay is in the 5'UTR region of the BC072543.1, NM_031561.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene NEWGENE_2301
Click here to find siRNAs for Gene Cd36

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
long-chain fatty acid metabolic process
positive regulation of cytokine production
positive regulation of cell-matrix adhesion
pattern recognition receptor signaling pathway
negative regulation of systemic arterial blood pressure
fatty acid metabolic process
triglyceride metabolic process
receptor-mediated endocytosis
phagocytosis, recognition
cell adhesion
signal transduction
cell surface receptor signaling pathway
nitric oxide mediated signal transduction
response to nutrient
response to xenobiotic stimulus
response to mechanical stimulus
negative regulation of gene expression
positive regulation of macrophage derived foam cell differentiation
positive regulation of cholesterol storage
response to activity
fatty acid transport
long-chain fatty acid transport
long-chain fatty acid import across plasma membrane
negative regulation of angiogenesis
fatty acid oxidation
lipid storage
cGMP-mediated signaling
positive regulation of blood coagulation
cholesterol transport
response to estradiol
positive regulation of interleukin-12 production
positive regulation of interleukin-6 production
positive regulation of tumor necrosis factor production
cellular response to insulin stimulus
plasma lipoprotein particle clearance
low-density lipoprotein particle clearance
lipoprotein transport
positive regulation of I-kappaB kinase/NF-kappaB signaling
apoptotic cell clearance
positive regulation of MAPK cascade
long-chain fatty acid import into cell
digestive tract development
positive regulation of peptidyl-tyrosine phosphorylation
defense response to Gram-positive bacterium
low-density lipoprotein particle mediated signaling
positive regulation of phagocytosis, engulfment
response to growth hormone
positive regulation of macrophage cytokine production
cellular response to bacterial lipopeptide
cellular response to lipopolysaccharide
cellular response to lipoteichoic acid
cellular response to hydroperoxide
regulation of removal of superoxide radicals
positive regulation of blood microparticle formation
positive regulation of reactive oxygen species metabolic process

Function(s)

low-density lipoprotein particle receptor activity
protein binding
high-density lipoprotein particle binding
lipid binding
low-density lipoprotein particle binding
transforming growth factor beta binding
thrombospondin receptor activity
oleic acid binding
lipoteichoic acid immune receptor activity
lipoprotein particle binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0400001468.rn.1	TC0400000195.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400001442.rn.1	TC0400000195.rn.1	RTA TC