Rn01442795_m1 Best Coverage

• Gene Symbol: Cops5
• Gene Name: COP9 signalosome subunit 5
• Gene Aliases: -
• Chromosome Location: Chr.5: 8876090 - 8894342 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cops5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001025695.1	NP_001020866.1	6 - 7	883		154
	XM_006237758.2	XP_006237820.1	6 - 7	823		154
GenBank mRNA	BC098736.1	-	6 - 7	883	7385252	154
	FQ215612.1	-	6 - 7	806		154
	FQ215908.1	-	6 - 7	806		154
	FQ227775.1	-	6 - 7	807		154
	FQ232542.1	-	6 - 7	806		154

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500000072.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cops5

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Process(es)

protein deneddylation
proteolysis
cullin deneddylation
protein deubiquitination
positive regulation of transcription from RNA polymerase II promoter
regulation of JNK cascade
regulation of cell cycle
exosomal secretion

Function(s)

thiol-dependent ubiquitin-specific protease activity
metallopeptidase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P095996	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	650966	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	253134	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	782776	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	163187	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	229077	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	313356	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	735448	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	634523	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	324237	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	324745	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	7211	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	14253	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	145951	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	855230	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	23505	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	158562	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P095996	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P095996	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P095996	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P10476	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	67738	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	78808	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	33265	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10867299	-	-
Affymetrix Rat Gene 1.0 ST Array	10867303	-	-
Affymetrix Rat Gene 1.0 ST Array	10867302	-	-
Affymetrix Rat Gene 1.0 ST Array	10867301	-	-
Affymetrix Rat Gene 1.0 ST Array	10867298	-	-
Affymetrix Rat Gene 1.0 ST Array	10867300	-	-
Affymetrix Rat Gene 1.0 ST Array	10867305	-	-
Affymetrix Rat Gene 1.0 ST Array	10867304	-	-
Affymetrix Rat Gene 1.1 ST Array	10867297	-	-
Rat Genome 230 2.0 Array	1372209_at	-	-
Rat Genome 230 2.0 Array	1372209_PM_at	-	-
Affymetrix HT Rat Focus Array	1372209_PM_at	-	-
Affymetrix HT Rat Focus Array	1372209_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500000524.rn.1	TC0500000072.rn.1	RTA TC
Rat Expression Set 230	1372209_at	-	-
Rat Expression Set 230	1372209_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10867297	-	-
Rat Genome U34 Set	rc_AI105072_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20919188	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1364140	-	-