Rn01444223_m1

• Gene Symbol: Nr1i2
• Gene Name: nuclear receptor subfamily 1, group I, member 2
• Gene Aliases: PXR
• Chromosome Location: Chr.11: 65022100 - 65058546 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nr1i2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_052980.2	NP_443212.1	1 - 2	221		78
GenBank mRNA	AF151377.1	-	1 - 2	194		78
	BC091138.1	-	1 - 2	222		78
	CO575646.1	-	1 - 2	221		78

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1100000640.rn.1

Additional Information:

This assay is in the 5'UTR region of the AF151377.1, NM_052980.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nr1i2

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
xenobiotic metabolic process
positive regulation of gene expression
intracellular receptor signaling pathway
xenobiotic catabolic process
xenobiotic transport
steroid hormone mediated signaling pathway
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
xenobiotic export

Function(s)

RNA polymerase II transcription regulatory region sequence-specific DNA binding
DNA-binding transcription activator activity, RNA polymerase II-specific
steroid hormone receptor activity
nuclear receptor activity
zinc ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1100003469.rn.1	TC1100000640.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1100003468.rn.1	TC1100000640.rn.1	RTA TC