Rn01445255_m1

• Gene Symbol: Ctsh
• Gene Name: cathepsin H
• Gene Aliases: -
• Chromosome Location: Chr.8: 97439153 - 97458293 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ctsh
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012939.1	NP_037071.1	3 - 4	227		116
	XM_008766440.1	XP_008764662.1	3 - 4	278		116
GenBank mRNA	BC085352.1	-	3 - 4	242	7115929	116
	FQ210730.1	-	3 - 4	237		116
	FQ213183.1	-	3 - 4	237		116
	FQ219177.1	-	3 - 4	237		116
	FQ219285.1	-	3 - 4	237		116
	FQ219548.1	-	3 - 4	237		116
	FQ219611.1	-	3 - 4	255		116
	FQ223707.1	-	3 - 4	233		116
	FQ228686.1	-	3 - 4	297		116
	FQ228906.1	-	3 - 4	244		116
	FQ228938.1	-	3 - 4	234		116
	FQ228956.1	-	3 - 4	264		116
	M38135.1	-	3 - 4	221		116
	Y00708.1	-	3 - 4	227		116

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800001277.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Protease, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ctsh

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

metanephros development
T cell mediated cytotoxicity
adaptive immune response
immune response-regulating signaling pathway
proteolysis
apoptotic process
activation of cysteine-type endopeptidase activity involved in apoptotic process
spermatogenesis
positive regulation of cell proliferation
positive regulation of gene expression
positive regulation of epithelial cell migration
neuropeptide catabolic process
bradykinin catabolic process
positive regulation of peptidase activity
positive regulation of cell migration
zymogen activation
protein destabilization
response to retinoic acid
membrane protein proteolysis
negative regulation of apoptotic process
surfactant homeostasis
positive regulation of angiogenesis
dichotomous subdivision of terminal units involved in lung branching
ERK1 and ERK2 cascade
cellular response to thyroid hormone stimulus
positive regulation of apoptotic signaling pathway

Function(s)

endopeptidase activity
aminopeptidase activity
cysteine-type endopeptidase activity
serine-type endopeptidase activity
peptidase activity
cysteine-type peptidase activity
cysteine-type endopeptidase activator activity involved in apoptotic process
peptidase activator activity involved in apoptotic process
HLA-A specific activating MHC class I receptor activity
kininogen binding
protein complex binding
protein self-association
thyroid hormone binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0800009312.rn.1	TC0800001277.rn.1	RTA TC