Rn01445259_m1

• Gene Symbol: Ctsh
• Gene Name: cathepsin H
• Gene Aliases: -
• Chromosome Location: Chr.8: 97439153 - 97458293 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ctsh
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012939.1	NP_037071.1	8 - 9	633		65
	XM_008766440.1	XP_008764662.1	8 - 9	684		65
GenBank mRNA	BC085352.1	-	8 - 9	648	7115929	65
	FQ210730.1	-	8 - 9	643		65
	FQ213183.1	-	8 - 9	643		65
	FQ219177.1	-	8 - 9	643		65
	FQ219285.1	-	8 - 9	643		65
	FQ219548.1	-	8 - 9	643		65
	FQ219611.1	-	8 - 9	661		65
	FQ220588.1	-	5 - 6	412		65
	FQ223707.1	-	8 - 9	639		65
	FQ228686.1	-	8 - 9	703		65
	FQ228906.1	-	8 - 9	650		65
	FQ228938.1	-	8 - 9	640		65
	FQ228956.1	-	8 - 9	670		65
	M38135.1	-	8 - 9	627		65
	Y00708.1	-	8 - 9	633		65

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800001277.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Protease, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ctsh

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

metanephros development
T cell mediated cytotoxicity
adaptive immune response
immune response-regulating signaling pathway
proteolysis
apoptotic process
activation of cysteine-type endopeptidase activity involved in apoptotic process
spermatogenesis
positive regulation of cell proliferation
positive regulation of gene expression
positive regulation of epithelial cell migration
neuropeptide catabolic process
bradykinin catabolic process
positive regulation of peptidase activity
positive regulation of cell migration
zymogen activation
protein destabilization
response to retinoic acid
membrane protein proteolysis
negative regulation of apoptotic process
surfactant homeostasis
positive regulation of angiogenesis
dichotomous subdivision of terminal units involved in lung branching
ERK1 and ERK2 cascade
cellular response to thyroid hormone stimulus
positive regulation of apoptotic signaling pathway

Function(s)

endopeptidase activity
aminopeptidase activity
cysteine-type endopeptidase activity
serine-type endopeptidase activity
peptidase activity
cysteine-type peptidase activity
cysteine-type endopeptidase activator activity involved in apoptotic process
peptidase activator activity involved in apoptotic process
HLA-A specific activating MHC class I receptor activity
kininogen binding
protein complex binding
protein self-association
thyroid hormone binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0800009317.rn.1	TC0800001277.rn.1	RTA TC