Rn01451938_m1 Best Coverage

• Gene Symbol: S100a4
• Gene Name: S100 calcium-binding protein A4
• Gene Aliases: 18A2, 42A, CAPL, MTS1, P9ka, PEL98, RNP9KA
• Chromosome Location: Chr.2: 189997278 - 189999587 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: S100a4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012618.2	NP_036750.1	2 - 3	200		145
	XM_006232592.2	XP_006232654.1	2 - 3	260		145
GenBank mRNA	FQ215053.1	-	2 - 3	200		145
	FQ220722.1	-	2 - 3	200		145
	FQ221062.1	-	2 - 3	200		145
	FQ221355.1	-	2 - 3	200		145
	FQ221406.1	-	2 - 3	201		145
	FQ221428.1	-	2 - 3	200		145
	FQ221508.1	-	2 - 3	200		145
	FQ221699.1	-	2 - 3	203		145
	FQ221706.1	-	2 - 3	201		145
	FQ221757.1	-	2 - 3	201		145
	FQ221860.1	-	2 - 3	201		145
	FQ222027.1	-	2 - 3	201		145
	FQ222069.1	-	2 - 3	200		145
	FQ222186.1	-	2 - 3	200		145
	FQ222219.1	-	2 - 3	201		145
	FQ222585.1	-	2 - 3	200		145
	FQ222875.1	-	2 - 3	200		145
	FQ223009.1	-	2 - 3	200		145
	FQ223047.1	-	2 - 3	204		145
	FQ223108.1	-	2 - 3	183		145
	FQ223128.1	-	2 - 3	201		145
	FQ228364.1	-	2 - 3	202		145
	FQ228506.1	-	2 - 3	200		145
	FQ228607.1	-	2 - 3	202		145
	FQ229007.1	-	2 - 3	199		145
	FQ229874.1	-	2 - 3	200		145
	J03628.1	-	2 - 3	201		145
	X64022.1	-	1 - 2	143		145

More Information

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene S100a4

Panther Classification:

Molecular Function -

calmodulin-related

Gene Ontology Categories:

Process(es)

positive regulation of I-kappaB kinase/NF-kappaB signaling

Function(s)

actin binding
calcium ion binding
protein binding
identical protein binding
protein homodimerization activity
poly(A) RNA binding
protein heterodimerization activity
calcium-dependent protein binding
RAGE receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P11489	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	913445	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	283420	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	105370	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P11489	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P11489	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P11489	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P332021	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1060286	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P11489	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700420391	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	101250	-	-
Agilent Rat cDNA Microarray (G4105A)	700420391	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10817058	-	-
Affymetrix Rat Gene 1.0 ST Array	10817059	-	-
Affymetrix Rat Gene 1.0 ST Array	10817060	-	-
Affymetrix Rat Gene 1.1 ST Array	10817057	-	-
Rat Genome 230 2.0 Array	1367846_PM_at	-	-
Rat Genome 230 2.0 Array	1367846_at	-	-
Affymetrix HT Rat Focus Array	1367846_PM_at	-	-
Affymetrix HT Rat Focus Array	1367846_at	-	-
Rat Expression Set 230	1367846_at	-	-
Rat Expression Set 230	1367846_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10817057	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21475949	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1365192	-	-
RatRef-12 Expression BeadChip	ILMN_61745	-	-