Rn01454585_g1 Best Coverage

• Gene Symbol: Vegfb
• Gene Name: vascular endothelial growth factor B
• Gene Aliases: -
• Chromosome Location: Chr.1: 222237000 - 222242742 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Vegfb
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053549.1	NP_446001.1	3 - 4	556		68
	XM_006230910.2	XP_006230972.1	3 - 4	653		68
	XM_006230911.2	XP_006230973.1	3 - 4	654		68
	XM_006230912.2	XP_006230974.1	3 - 4	644		68
GenBank mRNA	AF022952.1	-	1 - 2	209		68
	AF032925.1	-	1 - 2	152		68
	BC076395.1	-	3 - 4	556	7109119	68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100007183.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vegfb

Panther Classification:

Molecular Function -

growth factor

Gene Ontology Categories:

Process(es)

angiogenesis
positive regulation of endothelial cell proliferation
protein O-linked glycosylation
heart development
negative regulation of gene expression
positive regulation of vascular endothelial growth factor receptor signaling pathway
positive regulation of vascular wound healing
response to drug
negative regulation of apoptotic process
positive regulation of vascular permeability
negative regulation of neuron apoptotic process
positive regulation of peptidyl-tyrosine phosphorylation
positive chemotaxis
induction of positive chemotaxis
positive regulation of cell division
positive regulation of protein kinase B signaling
cardiac muscle contraction
positive regulation of mast cell chemotaxis
coronary vasculature development
positive regulation of ERK1 and ERK2 cascade

Function(s)

molecular_function
growth factor activity
heparin binding
chemoattractant activity
protein homodimerization activity
vascular endothelial growth factor receptor 1 binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P149280	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	120091	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	958296	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	223885	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P149280	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P149280	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P149280	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P16059	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P159040	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	701246759	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	50576	-	-
Agilent Rat cDNA Microarray (G4105A)	701246759	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10728326	-	-
Affymetrix Rat Gene 1.0 ST Array	10728324	-	-
Affymetrix Rat Gene 1.0 ST Array	10728325	-	-
Affymetrix Rat Gene 1.0 ST Array	10728323	-	-
Affymetrix Rat Gene 1.0 ST Array	10728321	-	-
Affymetrix Rat Gene 1.0 ST Array	10728320	-	-
Affymetrix Rat Gene 1.0 ST Array	10728327	-	-
Affymetrix Rat Gene 1.0 ST Array	10728322	-	-
Affymetrix Rat Gene 1.1 ST Array	10728319	-	-
Rat Genome 230 2.0 Array	1380854_PM_at	-	-
Rat Genome 230 2.0 Array	1380854_at	-	-
Affymetrix HT Rat Focus Array	1380854_PM_at	-	-
Affymetrix HT Rat Focus Array	1380854_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100057778.rn.1	TC0100007183.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100057784.rn.1	TC0100007183.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100057788.rn.1	TC0100007183.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100057777.rn.1	TC0100007183.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100057779.rn.1	TC0100007183.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100057786.rn.1	TC0100007183.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100057781.rn.1	TC0100007183.rn.1	RTA TC
Rat Expression Set 230	1380854_PM_at	-	-
Rat Expression Set 230	1380854_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10728319	-	-
Rat Genome U34 Set	AF022952_at	-	-
Rat Genome U34 Set	AF022952_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21996686	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376698	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1375408	-	-