Rn01455646_m1 Best Coverage

• Gene Symbol: Tbp
• Gene Name: TATA box binding protein
• Gene Aliases: TFIID
• Chromosome Location: Chr.1: 57491385 - 57509335 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tbp
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001004198.1	NP_001004198.1	4 - 5	791		75
	XM_006227980.2	XP_006228042.1	4 - 5	734		75
	XM_008758747.1	XP_008756969.1	4 - 5	734		75
	XM_008758748.1	XP_008756970.1	4 - 5	942		75
GenBank mRNA	BC081939.1	-	4 - 5	791	7115389	75

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100000611.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Endogenous Controls, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tbp

Panther Classification:

Molecular Function -

general transcription factor

Gene Ontology Categories:

Process(es)

DNA-templated transcription, initiation
transcription from RNA polymerase II promoter
transcription from RNA polymerase III promoter
spermatogenesis
positive regulation of transcription, DNA-templated

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II repressing transcription factor binding
DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
transcription factor binding
transcription regulatory region DNA binding
repressing transcription factor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0100003889.rn.1	TC0100000611.rn.1	RTA TC