Rn01458059_m1 Best Coverage

• Gene Symbol: Aplp1
• Gene Name: amyloid beta (A4) precursor-like protein 1
• Gene Aliases: Aplp1_retired, RGD1561211
• Chromosome Location: Chr.1: 88897525 - 88908750 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Aplp1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001100802.1	NP_001094272.1	8 - 9	1117		76
	XM_008759179.1	XP_008757401.1	7 - 8	965		76
GenBank mRNA	BC161904.1	-	8 - 9	1117	8367333	76
	FQ212221.1	-	8 - 9	1077		76
	FQ213451.1	-	8 - 9	1129		76

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100005151.rn.1

• Set Membership: Amplicon length between 71 and 85, Apoptosis, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

protease inhibitor

Gene Ontology Categories:

Process(es)

mRNA polyadenylation
regulation of translation
extracellular matrix organization
negative regulation of cAMP biosynthetic process
forebrain development
cellular response to norepinephrine stimulus

Function(s)

protein binding
heparin binding
alpha-2A adrenergic receptor binding
alpha-2B adrenergic receptor binding
alpha-2C adrenergic receptor binding
identical protein binding
transition metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P003408	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	288799	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	279935	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	283877	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	109567	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	513527	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	419566	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	219068	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	622806	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	29864	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P003408	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P003408	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P003408	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P827480	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	77525	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10720585	-	-
Affymetrix Rat Gene 1.0 ST Array	10720582	-	-
Affymetrix Rat Gene 1.0 ST Array	10720576	-	-
Affymetrix Rat Gene 1.0 ST Array	10720583	-	-
Affymetrix Rat Gene 1.0 ST Array	10720588	-	-
Affymetrix Rat Gene 1.0 ST Array	10720575	-	-
Affymetrix Rat Gene 1.0 ST Array	10720581	-	-
Affymetrix Rat Gene 1.0 ST Array	10720577	-	-
Affymetrix Rat Gene 1.0 ST Array	10720579	-	-
Affymetrix Rat Gene 1.0 ST Array	10720587	-	-
Affymetrix Rat Gene 1.0 ST Array	10720586	-	-
Affymetrix Rat Gene 1.0 ST Array	10720573	-	-
Affymetrix Rat Gene 1.0 ST Array	10720584	-	-
Affymetrix Rat Gene 1.0 ST Array	10720580	-	-
Affymetrix Rat Gene 1.0 ST Array	10720578	-	-
Affymetrix Rat Gene 1.0 ST Array	10720574	-	-
Affymetrix Rat Gene 1.1 ST Array	10720572	-	-
Rat Genome 230 2.0 Array	1389307_at	-	-
Rat Genome 230 2.0 Array	1389307_PM_at	-	-
Affymetrix HT Rat Focus Array	1389307_at	-	-
Affymetrix HT Rat Focus Array	1389307_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100041291.rn.1	TC0100005151.rn.1	RTA TC
Rat Expression Set 230	1389307_at	-	-
Rat Expression Set 230	1389307_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10720572	-	-
Rat Genome U34 Set	rc_AA943617_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21649445	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1369327	-	-