Rn01458849_g1 Best Coverage

• Gene Symbol: S100a16
• Gene Name: S100 calcium binding protein A16
• Gene Aliases: -
• Chromosome Location: Chr.2: 189923140 - 189928850 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: S100a16
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108557.2	NP_001102027.1	2 - 3	222		73
	XM_006232717.2	XP_006232779.1	2 - 3	296		73
	XM_006232718.1	XP_006232780.1	2 - 3	213		73
GenBank mRNA	BC158598.1	-	2 - 3	222	7127572	73
	FQ209774.1	-	2 - 3	224		73
	FQ214291.1	-	2 - 3	205		73
	FQ214430.1	-	2 - 3	218		73
	FQ229313.1	-	2 - 3	230		73

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200001614.rn.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

calmodulin-related

Gene Ontology Categories:

Process(es)

response to calcium ion

Function(s)

calcium ion binding
protein homodimerization activity
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P396123	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	781841	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	530464	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	107647	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P396123	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P396123	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P396123	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P396123	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	10	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10817048	-	-
Affymetrix Rat Gene 1.0 ST Array	10817049	-	-
Affymetrix Rat Gene 1.1 ST Array	10817046	-	-
Rat Genome 230 2.0 Array	1388356_at	-	-
Rat Genome 230 2.0 Array	1388356_PM_at	-	-
Affymetrix HT Rat Focus Array	1388356_PM_at	-	-
Affymetrix HT Rat Focus Array	1388356_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200010831.rn.1	TC0200001614.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200010832.rn.1	TC0200001614.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200010830.rn.1	TC0200001614.rn.1	RTA TC
Rat Expression Set 230	1388356_at	-	-
Rat Expression Set 230	1388356_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10817046	-	-
Rat Genome U34 Set	rc_AI011560_f_at	-	-
Rat Genome U34 Set	rc_AI171314_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21236595	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1649818	-	-