Rn01459354_m1

Gene Symbol:

LOC102555341 Arntl2

Gene Name:

aryl hydrocarbon receptor nuclear translocator-like protein 2-like

aryl hydrocarbon receptor nuclear translocator-like 2

Gene Aliases:

-

Arnt4, Bmal2

Chromosome Location:

Chr.4: 181205757 - 181222088 on Build Rnor_6.0

Chromosome Location:

Chr.4: 181103774 - 181158415 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: LOC102555341
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008763468.1	XP_008761690.1		1149		59

Gene Symbol: Arntl2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_133391.1	NP_596882.1	14 - 15	1578		59
GenBank mRNA	AF327071.1	-	14 - 15	1584		59
	AY014837.1	-	13 - 14	1482		59
	AY014838.1	-	13 - 14	1491		59
	JQ361086.1	-	14 - 15	1605		59

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400002067.rn.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription by RNA polymerase II
transcription by RNA polymerase II
signal transduction
circadian rhythm
positive regulation of circadian rhythm
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II

Function(s)

molecular_function
DNA binding
DNA-binding transcription factor activity
protein dimerization activity
E-box binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P389444	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P085971	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P085971	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P389444	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P389444	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P085971	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P389444	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P085971	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P259977	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P389444	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	103551	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10859680	-	-
Affymetrix Rat Gene 1.0 ST Array	10859676	-	-
Affymetrix Rat Gene 1.0 ST Array	10859675	-	-
Affymetrix Rat Gene 1.0 ST Array	10859674	-	-
Affymetrix Rat Gene 1.0 ST Array	10859678	-	-
Affymetrix Rat Gene 1.0 ST Array	10859679	-	-
Affymetrix Rat Gene 1.0 ST Array	10859672	-	-
Affymetrix Rat Gene 1.0 ST Array	10859673	-	-
Affymetrix Rat Gene 1.0 ST Array	10859677	-	-
Affymetrix Rat Gene 1.0 ST Array	10859681	-	-
Affymetrix Rat Gene 1.1 ST Array	10859671	-	-
Rat Genome 230 2.0 Array	1394782_PM_at	-	-
Rat Genome 230 2.0 Array	1394782_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400014844.rn.1	TC0400002067.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400014845.rn.1	TC0400002067.rn.1	RTA TC
Rat Expression Set 230	1394782_at	-	-
Rat Expression Set 230	1394782_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10859671	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21204969	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1357077	-	-
RatRef-12 Expression BeadChip	ILMN_63822	-	-