Rn01459401_m1 Best Coverage

• Gene Symbol: Clec7a
• Gene Name: C-type lectin domain family 7, member A
• Gene Aliases: Clec7b, RGD1565140
• Chromosome Location: Chr.4: 163216162 - 163227365 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Clec7a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001173386.1	NP_001166857.1	1 - 2	144		67
	XM_006237100.2	XP_006237162.1	1 - 2	267		67
GenBank mRNA	AB455106.1	-	1 - 2	236		67
	AB455107.1	-	1 - 2	236		67
	BC166774.1	-	1 - 2	144		67
	GU357485.1	-	1 - 2	76		67

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400003862.rn.1

• Set Membership: Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

response to yeast
detection of yeast
pattern recognition receptor signaling pathway
response to molecule of fungal origin
leukocyte activation involved in immune response
cell surface pattern recognition receptor signaling pathway
phagocytosis, recognition
phagocytosis, engulfment
cell recognition
positive regulation of tumor necrosis factor production
innate immune response
positive regulation of phagocytosis
cellular response to molecule of fungal origin
cell-cell adhesion

Function(s)

opsonin binding
(1->3)-beta-D-glucan binding
(1->3)-beta-D-glucan immune receptor activity
carbohydrate binding
polysaccharide binding
pattern recognition receptor activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0400027493.rn.1	TC0400003862.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400027492.rn.1	TC0400003862.rn.1	RTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21038162	-	-