Rn01459914_g1

• Gene Symbol: Spop
• Gene Name: speckle-type POZ protein
• Gene Aliases: -
• Chromosome Location: Chr.10: 83231197 - 83311987 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Spop
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001100496.1	NP_001093966.1	2 - 3	230		105
	XM_006247180.2	XP_006247242.1	3 - 4	1034		105
	XM_006247181.2	XP_006247243.1	4 - 5	341		105
	XM_006247182.2	XP_006247244.1	3 - 4	290		105
	XM_008767968.1	XP_008766190.1	3 - 4	386		105
	XM_008767969.1	XP_008766191.1	4 - 5	308		105
GenBank mRNA	BC166743.1	-	2 - 3	230	7938440	105
	FQ217100.1	-	4 - 5	538		105

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000001471.rn.1

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

ubiquitin-protein ligase, protein modifying enzyme

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
glucose homeostasis
protein ubiquitination involved in ubiquitin-dependent protein catabolic process
proteasome-mediated ubiquitin-dependent protein catabolic process
negative regulation of sequence-specific DNA binding transcription factor activity
positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
positive regulation of type B pancreatic cell apoptotic process

Function(s)

RNA polymerase II transcription factor binding
ubiquitin protein ligase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1000013179.rn.1	TC1000001471.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000013180.rn.1	TC1000001471.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000013175.rn.1	TC1000001471.rn.1	RTA TC