Rn01460113_m1 Best Coverage

• Gene Symbol: Rhbdf1
• Gene Name: rhomboid 5 homolog 1 (Drosophila)
• Gene Aliases: -
• Chromosome Location: Chr.10: 15672382 - 15685285 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rhbdf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001030034.1	NP_001025205.1	11 - 12	1693		58
	XM_006245977.2	XP_006246039.1	11 - 12	5511		58
	XM_008767578.1	XP_008765800.1	12 - 13	4628		58
	XM_008767579.1	XP_008765801.1	12 - 13	4503		58
	XM_008767580.1	XP_008765802.1	11 - 12	2613		58
GenBank mRNA	BC099777.1	-	11 - 12	1693		58

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000000279.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rhbdf1

Gene Ontology Categories:

Process(es)

proteolysis
cell population proliferation
protein transport
cell migration
regulation of epidermal growth factor receptor signaling pathway
regulation of protein secretion
negative regulation of protein secretion
regulation of proteasomal protein catabolic process

Function(s)

serine-type endopeptidase activity
growth factor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P055748	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	172816	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	464840	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	275799	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	333772	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	610660	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	695897	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	914973	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	384093	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	111456	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P055748	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P055748	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P055748	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P108063	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	97381	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10732610	-	-
Affymetrix Rat Gene 1.0 ST Array	10732619	-	-
Affymetrix Rat Gene 1.0 ST Array	10732611	-	-
Affymetrix Rat Gene 1.0 ST Array	10732622	-	-
Affymetrix Rat Gene 1.0 ST Array	10732616	-	-
Affymetrix Rat Gene 1.0 ST Array	10732614	-	-
Affymetrix Rat Gene 1.0 ST Array	10732621	-	-
Affymetrix Rat Gene 1.0 ST Array	10732612	-	-
Affymetrix Rat Gene 1.0 ST Array	10732608	-	-
Affymetrix Rat Gene 1.0 ST Array	10732617	-	-
Affymetrix Rat Gene 1.0 ST Array	10732625	-	-
Affymetrix Rat Gene 1.0 ST Array	10732620	-	-
Affymetrix Rat Gene 1.0 ST Array	10732609	-	-
Affymetrix Rat Gene 1.0 ST Array	10732623	-	-
Affymetrix Rat Gene 1.0 ST Array	10732615	-	-
Affymetrix Rat Gene 1.0 ST Array	10732613	-	-
Affymetrix Rat Gene 1.0 ST Array	10732618	-	-
Affymetrix Rat Gene 1.0 ST Array	10732624	-	-
Affymetrix Rat Gene 1.1 ST Array	10732607	-	-
Rat Genome 230 2.0 Array	1374191_at	-	-
Rat Genome 230 2.0 Array	1374191_PM_at	-	-
Affymetrix HT Rat Focus Array	1374191_at	-	-
Affymetrix HT Rat Focus Array	1374191_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000002884.rn.1	TC1000000279.rn.1	RTA TC
Rat Expression Set 230	1374191_PM_at	-	-
Rat Expression Set 230	1374191_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10732607	-	-
Rat Genome U34 Set	rc_AI060130_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22153482	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1368739	-	-