Rn01460628_m1 Best Coverage

• Gene Symbol: Acox1
• Gene Name: acyl-CoA oxidase 1, palmitoyl
• Gene Aliases: RATACOA1
• Chromosome Location: Chr.10: 104724534 - 104748003 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Acox1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017340.2	NP_059036.1		2031		63
GenBank mRNA	BC085743.1	-		2031	7109722	63
	J02752.1	-		2014		63

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000004144.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Acox1

Panther Classification:

Molecular Function -

oxidoreductase

Gene Ontology Categories:

Process(es)

very long-chain fatty acid metabolic process
generation of precursor metabolites and energy
lipid metabolic process
fatty acid beta-oxidation
prostaglandin metabolic process
spermatogenesis
peroxisome fission
fatty acid oxidation
fatty acid beta-oxidation using acyl-CoA oxidase
lipid homeostasis
positive regulation of cholesterol homeostasis

Function(s)

acyl-CoA dehydrogenase activity
acyl-CoA oxidase activity
receptor binding
fatty acid binding
palmitoyl-CoA oxidase activity
PDZ domain binding
protein N-terminus binding
flavin adenine dinucleotide binding
FAD binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P059390	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P059385	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	205528	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	836670	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	748736	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	508107	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	147154	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	155521	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	695422	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	804418	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	149433	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	280388	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	263687	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	289456	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	276395	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	96416	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	35936	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	167192	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	18811	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	113260	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P059390	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P059385	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P059385	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P059390	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P059390	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P059385	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P11926	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	701646795	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	64333	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	99120	-	-
Agilent Rat cDNA Microarray (G4105A)	701646795	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10749174	-	-
Affymetrix Rat Gene 1.0 ST Array	10749183	-	-
Affymetrix Rat Gene 1.0 ST Array	10749181	-	-
Affymetrix Rat Gene 1.0 ST Array	10749180	-	-
Affymetrix Rat Gene 1.0 ST Array	10749175	-	-
Affymetrix Rat Gene 1.0 ST Array	10749184	-	-
Affymetrix Rat Gene 1.0 ST Array	10749186	-	-
Affymetrix Rat Gene 1.0 ST Array	10749176	-	-
Affymetrix Rat Gene 1.0 ST Array	10749173	-	-
Affymetrix Rat Gene 1.0 ST Array	10749179	-	-
Affymetrix Rat Gene 1.0 ST Array	10749178	-	-
Affymetrix Rat Gene 1.0 ST Array	10749182	-	-
Affymetrix Rat Gene 1.0 ST Array	10749177	-	-
Affymetrix Rat Gene 1.1 ST Array	10749172	-	-
Rat Genome 230 2.0 Array	1367680_at	-	-
Rat Genome 230 2.0 Array	1367680_PM_at	-	-
Affymetrix HT Rat Focus Array	1367680_PM_at	-	-
Affymetrix HT Rat Focus Array	1367680_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000037717.rn.1	TC1000004144.rn.1	RTA TC
Rat Expression Set 230	1367680_PM_at	-	-
Rat Expression Set 230	1367680_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10749172	-	-
Rat Genome U34 Set	J02752_at	-	-
Rat Genome U34 Set	rc_AA799489_g_at	-	-
Rat Genome U34 Set	rc_AA799489_at	-	-
Rat Genome U34 Set	J02752_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21347047	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1363410	-	-
RatRef-12 Expression BeadChip	ILMN_61835	-	-