Rn01461586_g1 Best Coverage

• Gene Symbol: Tnfsf12
• Gene Name: tumor necrosis factor ligand superfamily member 12
• Gene Aliases: TWEAK
• Chromosome Location: Chr.10: 56290780 - 56300317 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tnfsf12
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001001513.2	NP_001001513.2	6 - 7	793		94
	XM_006246745.2	XP_006246807.1	6 - 7	1036		94
GenBank mRNA	AY607588.1	-	6 - 7	500		94
	BC079107.1	-	6 - 7	793		94
	FQ221626.1	-	6 - 7	422		94

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000003092.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tnfsf12

Gene Ontology Categories:

Process(es)

immune response
peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
histone arginine methylation
positive regulation of protein catabolic process
positive regulation of transcription, DNA-templated
extrinsic apoptotic signaling pathway
positive regulation of extrinsic apoptotic signaling pathway

Function(s)

transcription coactivator activity
cytokine activity
tumor necrosis factor receptor binding
histone-arginine N-methyltransferase activity
protein-arginine omega-N asymmetric methyltransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P160047	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	250722	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	172432	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	31431	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	402393	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	495084	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	132080	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	20086	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P160047	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P160047	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P160047	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P469248	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	80159	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10744172	-	-
Affymetrix Rat Gene 1.0 ST Array	10744176	-	-
Affymetrix Rat Gene 1.0 ST Array	10744179	-	-
Affymetrix Rat Gene 1.0 ST Array	10744173	-	-
Affymetrix Rat Gene 1.0 ST Array	10744175	-	-
Affymetrix Rat Gene 1.0 ST Array	10744174	-	-
Affymetrix Rat Gene 1.0 ST Array	10744178	-	-
Affymetrix Rat Gene 1.0 ST Array	10744180	-	-
Affymetrix Rat Gene 1.0 ST Array	10744177	-	-
Affymetrix Rat Gene 1.0 ST Array	10744181	-	-
Affymetrix Rat Gene 1.1 ST Array	10744171	-	-
Rat Genome 230 2.0 Array	1372503_PM_at	-	-
Rat Genome 230 2.0 Array	1372503_at	-	-
Affymetrix HT Rat Focus Array	1372503_at	-	-
Affymetrix HT Rat Focus Array	1372503_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000027552.rn.1	TC1000003092.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000027543.rn.1	TC1000003092.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000027551.rn.1	TC1000003092.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000027549.rn.1	TC1000003092.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000027544.rn.1	TC1000003092.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000027545.rn.1	TC1000003092.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000027547.rn.1	TC1000003092.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000027546.rn.1	TC1000003092.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000027548.rn.1	TC1000003092.rn.1	RTA TC
Rat Expression Set 230	1372503_PM_at	-	-
Rat Expression Set 230	1372503_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10744171	-	-
Rat Genome U34 Set	rc_AI010416_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20957826	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376502	-	-