Rn01462581_g1

• Gene Symbol: Muc1
• Gene Name: mucin 1, cell surface associated
• Gene Aliases: -
• Chromosome Location: Chr.2: 188542691 - 188547874 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Muc1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012602.1	NP_036734.1	2 - 3	1485		129
	XM_006232590.2	XP_006232652.1	3 - 4	1750		129
	XM_008761128.1	XP_008759350.1	3 - 4	1751		129
GenBank mRNA	BC166505.1	-	2 - 3	1485		129

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200001571.rn.1

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

response to hypoxia
in utero embryonic development
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
female pregnancy
negative regulation of transcription by competitive promoter binding
epithelial cell differentiation
positive regulation of transcription from RNA polymerase II promoter in response to stress
regulation of transcription from RNA polymerase II promoter in response to stress
cellular response to retinoic acid
positive regulation of histone H4 acetylation
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator

Function(s)

RNA polymerase II cis-regulatory region sequence-specific DNA binding
p53 binding
molecular_function
transcription coregulator activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0200010202.rn.1	TC0200001571.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200010203.rn.1	TC0200001571.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200010205.rn.1	TC0200001571.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200010197.rn.1	TC0200001571.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200010200.rn.1	TC0200001571.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200010204.rn.1	TC0200001571.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200010201.rn.1	TC0200001571.rn.1	RTA TC