Rn01463516_m1 Best Coverage

• Gene Symbol: Slco1a5
• Gene Name: solute carrier organic anion transporter family, member 1a5
• Gene Aliases: OATP-3, Oatp3, Slc21a7, Slco1a2
• Chromosome Location: Chr.4: 176445856 - 176528117 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Slco1a5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_030838.1	NP_110465.1	10 - 11	1508		86
	XM_006237642.2	XP_006237704.1	12 - 13	1723		86
	XM_006237643.2	XP_006237705.1	12 - 13	1743		86
	XM_006237646.2	XP_006237708.1	10 - 11	1524		86
	XM_006237648.2	XP_006237710.1	7 - 8	1936		86
	XM_008763432.1	XP_008761654.1	11 - 12	3092		86
GenBank mRNA	AF083469.1	-	10 - 11	1508		86
	FQ211722.1	-	12 - 13	1738		86

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400004027.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Transporter, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Slco1a5

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Process(es)

organic anion transport
monocarboxylic acid transport
bile acid and bile salt transport
organ regeneration
intestinal absorption
thyroid hormone transport

Function(s)

monocarboxylic acid transmembrane transporter activity
organic anion transmembrane transporter activity
bile acid transmembrane transporter activity
thyroid hormone transmembrane transporter activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P113879	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	957477	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	808222	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	100761	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	388789	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	863805	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	887971	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	407475	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	526431	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	362850	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	179894	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	177859	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P113879	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P113879	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P113879	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P113879	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	65088	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	32029	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10866627	-	-
Affymetrix Rat Gene 1.0 ST Array	10866621	-	-
Affymetrix Rat Gene 1.0 ST Array	10866633	-	-
Affymetrix Rat Gene 1.0 ST Array	10866620	-	-
Affymetrix Rat Gene 1.0 ST Array	10866628	-	-
Affymetrix Rat Gene 1.0 ST Array	10866623	-	-
Affymetrix Rat Gene 1.0 ST Array	10866635	-	-
Affymetrix Rat Gene 1.0 ST Array	10866631	-	-
Affymetrix Rat Gene 1.0 ST Array	10866625	-	-
Affymetrix Rat Gene 1.0 ST Array	10866634	-	-
Affymetrix Rat Gene 1.0 ST Array	10866624	-	-
Affymetrix Rat Gene 1.0 ST Array	10866626	-	-
Affymetrix Rat Gene 1.0 ST Array	10866630	-	-
Affymetrix Rat Gene 1.0 ST Array	10866629	-	-
Affymetrix Rat Gene 1.0 ST Array	10866632	-	-
Affymetrix Rat Gene 1.0 ST Array	10866622	-	-
Affymetrix Rat Gene 1.1 ST Array	10866606	-	-
Rat Genome 230 2.0 Array	1368606_PM_at	-	-
Rat Genome 230 2.0 Array	1368606_at	-	-
Affymetrix HT Rat Focus Array	1368606_at	-	-
Affymetrix HT Rat Focus Array	1368606_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400028533.rn.1	TC0400004027.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400028534.rn.1	TC0400004027.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400028530.rn.1	TC0400004027.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400028531.rn.1	TC0400004027.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400028527.rn.1	TC0400004027.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400028528.rn.1	TC0400004027.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400028532.rn.1	TC0400004027.rn.1	RTA TC
Rat Expression Set 230	1368606_PM_at	-	-
Rat Expression Set 230	1368606_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10866606	-	-
Rat Genome U34 Set	AF041105_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21472018	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1363789	-	-
RatRef-12 Expression BeadChip	ILMN_66737	-	-