Rn01463946_g1 Best Coverage

• Gene Symbol: Tnk1
• Gene Name: tyrosine kinase, non-receptor, 1
• Gene Aliases: -
• Chromosome Location: Chr.10: 56458650 - 56468449 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tnk1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001107012.1	NP_001100482.1	10 - 11	1843		73
	XM_006246704.2	XP_006246766.1	11 - 12	3301		73
	XM_006246705.2	XP_006246767.1	12 - 13	2376		73
	XM_006246707.2	XP_006246769.1	12 - 13	2046		73
	XM_006246709.2	XP_006246771.1	11 - 12	2223		73
	XM_008767827.1	XP_008766049.1	11 - 12	2752		73
	XM_008767828.1	XP_008766050.1	12 - 13	2140		73

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000003104.rn.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

transmembrane receptor protein tyrosine kinase signaling pathway
cell migration
peptidyl-tyrosine phosphorylation
cell differentiation
negative regulation of cell growth
peptidyl-tyrosine autophosphorylation
regulation of cell population proliferation
innate immune response
negative regulation of Ras protein signal transduction
protein autophosphorylation

Function(s)

protein tyrosine kinase activity
non-membrane spanning protein tyrosine kinase activity
ATP binding
hormone receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P040120	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	667412	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	295729	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	864512	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	807319	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	156851	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P040120	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P040120	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P040120	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P255905	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	6011	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	32284	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	30617	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10744272	-	-
Affymetrix Rat Gene 1.0 ST Array	10744264	-	-
Affymetrix Rat Gene 1.0 ST Array	10744259	-	-
Affymetrix Rat Gene 1.0 ST Array	10744267	-	-
Affymetrix Rat Gene 1.0 ST Array	10744255	-	-
Affymetrix Rat Gene 1.0 ST Array	10744271	-	-
Affymetrix Rat Gene 1.0 ST Array	10744258	-	-
Affymetrix Rat Gene 1.0 ST Array	10744266	-	-
Affymetrix Rat Gene 1.0 ST Array	10744270	-	-
Affymetrix Rat Gene 1.0 ST Array	10744256	-	-
Affymetrix Rat Gene 1.0 ST Array	10744262	-	-
Affymetrix Rat Gene 1.0 ST Array	10744261	-	-
Affymetrix Rat Gene 1.0 ST Array	10744269	-	-
Affymetrix Rat Gene 1.0 ST Array	10744268	-	-
Affymetrix Rat Gene 1.0 ST Array	10744257	-	-
Affymetrix Rat Gene 1.0 ST Array	10744265	-	-
Affymetrix Rat Gene 1.0 ST Array	10744260	-	-
Affymetrix Rat Gene 1.1 ST Array	10744254	-	-
Rat Genome 230 2.0 Array	1380703_at	-	-
Rat Genome 230 2.0 Array	1380703_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000027696.rn.1	TC1000003104.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000027697.rn.1	TC1000003104.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10744254	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21434820	-	-
ABI Rat Genome Survey Microarray	21589563	-	-
ABI Rat Genome Survey Microarray	21594479	-	-
ABI Rat Genome Survey Microarray	21643656	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1365252	-	-