Rn01465117_m1 Best Coverage

• Gene Symbol: Ogfod3
• Gene Name: 2-oxoglutarate and iron-dependent oxygenase domain containing 3
• Gene Aliases: RGD1305007
• Chromosome Location: Chr.10: 110378533 - 110406377 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ogfod3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001013976.1	NP_001013998.1	7 - 8	822		77
GenBank mRNA	BC088238.1	-	7 - 8	822	7326036	77
	FQ225392.1	-	7 - 8	811		77

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000004307.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ogfod3

Panther Classification:

Molecular Function -

protein modifying enzyme

Gene Ontology Categories:

Process(es)

oxidation-reduction process

Function(s)

iron ion binding
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
L-ascorbic acid binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1027244	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	570760	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	329546	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	824450	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	695979	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	396618	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	343263	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	417271	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	647437	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	120289	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	16211	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	198541	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	738843	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	649673	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	155603	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	191375	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	148738	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	779007	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	499723	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	52142	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	839622	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	524277	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	145632	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	45271	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	66761	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1027244	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1027244	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1027244	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1027244	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	66020	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	64339	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	61907	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10749784	-	-
Affymetrix Rat Gene 1.0 ST Array	10749786	-	-
Affymetrix Rat Gene 1.0 ST Array	10749783	-	-
Affymetrix Rat Gene 1.0 ST Array	10749787	-	-
Affymetrix Rat Gene 1.0 ST Array	10749785	-	-
Affymetrix Rat Gene 1.0 ST Array	10749782	-	-
Affymetrix Rat Gene 1.0 ST Array	10749788	-	-
Affymetrix Rat Gene 1.0 ST Array	10749779	-	-
Affymetrix Rat Gene 1.0 ST Array	10749781	-	-
Affymetrix Rat Gene 1.1 ST Array	10749778	-	-
Rat Genome 230 2.0 Array	1374292_PM_at	-	-
Rat Genome 230 2.0 Array	1374292_at	-	-
Affymetrix HT Rat Focus Array	1374292_at	-	-
Affymetrix HT Rat Focus Array	1374292_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000039370.rn.1	TC1000004307.rn.1	RTA TC
Rat Expression Set 230	1374292_PM_at	-	-
Rat Expression Set 230	1374292_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10749778	-	-
Rat Genome U34 Set	rc_AI072425_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20787389	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1369769	-	-