Rn01465442_m1

• Gene Symbol: Vamp2
• Gene Name: vesicle-associated membrane protein 2
• Gene Aliases: RATVAMPB, RATVAMPIR, SYB, Syb2
• Chromosome Location: Chr.10: 55675119 - 55679405 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Vamp2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012663.2	NP_036795.1	4 - 5	409		116
GenBank mRNA	BC074003.1	-	4 - 5	409	7097683	116
	M24105.1	-	3 - 4	347		116

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000000907.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vamp2

Gene Ontology Categories:

Process(es)

protein complex assembly
vesicle fusion
neurotransmitter secretion
response to glucose
protein transport
synaptic vesicle exocytosis
vesicle-mediated transport
calcium ion regulated exocytosis
regulation of exocytosis
cellular response to insulin stimulus
Golgi to plasma membrane protein transport
eosinophil degranulation
neutrophil degranulation
natural killer cell degranulation
long-term synaptic potentiation
regulation of vesicle-mediated transport
membrane fusion
mucus secretion
positive regulation of intracellular protein transport
regulation of histamine secretion by mast cell

Function(s)

SNARE binding
SNAP receptor activity
protein binding
calmodulin binding
phospholipid binding
protein C-terminus binding
myosin binding
syntaxin-1 binding
syntaxin binding
protein complex binding
identical protein binding
calcium-dependent protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P447539	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	288703	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	509032	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P447539	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P447539	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P447539	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P555123	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P11508	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P447539	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700647372	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	53252	-	-
Agilent Rat cDNA Microarray (G4105A)	700647372	-	-
Agilent Rat cDNA Microarray (G4105A)	701747228	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10734876	-	-
Affymetrix Rat Gene 1.0 ST Array	10734877	-	-
Affymetrix Rat Gene 1.0 ST Array	10734878	-	-
Affymetrix Rat Gene 1.0 ST Array	10734881	-	-
Affymetrix Rat Gene 1.0 ST Array	10734879	-	-
Affymetrix Rat Gene 1.1 ST Array	10734875	-	-
Rat Genome 230 2.0 Array	1369974_PM_at	-	-
Rat Genome 230 2.0 Array	1371160_PM_at	-	-
Rat Genome 230 2.0 Array	1371160_at	-	-
Rat Genome 230 2.0 Array	1369974_at	-	-
Affymetrix HT Rat Focus Array	1371160_at	-	-
Affymetrix HT Rat Focus Array	1369974_PM_at	-	-
Affymetrix HT Rat Focus Array	1369974_at	-	-
Affymetrix HT Rat Focus Array	1371160_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000007763.rn.1	TC1000000907.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000007762.rn.1	TC1000000907.rn.1	RTA TC
Rat Expression Set 230	1369974_at	-	-
Rat Expression Set 230	1371160_PM_at	-	-
Rat Expression Set 230	1371160_at	-	-
Rat Expression Set 230	1369974_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10734875	-	-
Rat Genome U34 Set	M24105_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21985877	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1360798	-	-
RatRef-12 Expression BeadChip	ILMN_49169	-	-