Rn01466708_m1 Best Coverage

• Gene Symbol: Smg6
• Gene Name: SMG6 nonsense mediated mRNA decay factor
• Gene Aliases: LRRGT00040, RGD1309609
• Chromosome Location: Chr.10: 61526041 - 61542583 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Smg6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001105808.1	NP_001099278.1	12 - 13	3733		60
	XM_008767960.1	XP_008766182.1	2 - 3	202		60

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000001061.rn.1

• Set Membership: Amplicon length less than or equal to 70, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
telomere maintenance
RNA phosphodiester bond hydrolysis, endonucleolytic

Function(s)

endoribonuclease activity
telomeric DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1000009623.rn.1	TC1000001061.rn.1	RTA TC