Rn01473366_g1

• Gene Symbol: Atp6v1c2
• Gene Name: ATPase, H+ transporting, lysosomal V1 subunit C2
• Gene Aliases: -
• Chromosome Location: Chr.6: 42585976 - 42632289 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Atp6v1c2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001014199.1	NP_001014221.1	13 - 14	1320		65
GenBank mRNA	AY594319.1	-	12 - 13	1245		65
	BC079083.1	-	13 - 14	1320	7122992	65

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600002190.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Transporter, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atp6v1c2

Panther Classification:

Molecular Function -

ATP synthase

Gene Ontology Categories:

Process(es)

ATP hydrolysis coupled proton transport
positive regulation of Wnt signaling pathway
hydrogen ion transmembrane transport

Function(s)

hydrogen-exporting ATPase activity, phosphorylative mechanism
hydrogen ion transmembrane transporter activity
protein dimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P382482	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P382482	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P382482	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P382482	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P382482	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	70465	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	3802	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	6984	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	58150	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10940631	-	-
Affymetrix Rat Gene 1.1 ST Array	10940631	-	-
Rat Genome 230 2.0 Array	1376239_at	-	-
Rat Genome 230 2.0 Array	1376239_PM_at	-	-
Affymetrix HT Rat Focus Array	1376239_PM_at	-	-
Affymetrix HT Rat Focus Array	1376239_at	-	-
Affymetrix Rat Clariom S Assay	PSR0600015885.rn.1	TC0600002190.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600015887.rn.1	TC0600002190.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600015886.rn.1	TC0600002190.rn.1	RTA TC
Rat Expression Set 230	1376239_at	-	-
Rat Expression Set 230	1376239_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10940631	-	-
Rat Genome U34 Set	rc_AA817977_s_at	-	-
Rat Genome U34 Set	rc_AI232677_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22070363	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1371030	-	-