Rn01473877_m1 Best Coverage

• Gene Symbol: Sdr16c5
• Gene Name: short chain dehydrogenase/reductase family 16C, member 5
• Gene Aliases: RGD1565999, Rdhe2
• Chromosome Location: Chr.5: 16904926 - 16930076 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sdr16c5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001106634.1	NP_001100104.1	5 - 6	1059		121
	XM_006237836.2	XP_006237898.1	6 - 7	946		121

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500002246.rn.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

biological_process
retinol metabolic process
retinal metabolic process
keratinocyte proliferation
oxidation-reduction process

Function(s)

molecular_function
retinol dehydrogenase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P504041	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	527362	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	484680	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	488436	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	409786	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	684245	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	316693	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	625371	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	660959	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	491605	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	523253	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	397255	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	27077	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	948855	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	126694	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	92349	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	118633	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P504041	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P504041	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P504041	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P504041	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10875290	-	-
Affymetrix Rat Gene 1.0 ST Array	10875289	-	-
Affymetrix Rat Gene 1.0 ST Array	10875292	-	-
Affymetrix Rat Gene 1.0 ST Array	10875288	-	-
Affymetrix Rat Gene 1.0 ST Array	10875291	-	-
Affymetrix Rat Gene 1.0 ST Array	10875293	-	-
Affymetrix Rat Gene 1.1 ST Array	10875287	-	-
Rat Genome 230 2.0 Array	1384206_at	-	-
Rat Genome 230 2.0 Array	1384206_PM_at	-	-
Affymetrix HT Rat Focus Array	1384206_PM_at	-	-
Affymetrix HT Rat Focus Array	1384206_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500017075.rn.1	TC0500002246.rn.1	RTA TC
Rat Expression Set 230	1384206_PM_at	-	-
Rat Expression Set 230	1384206_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10875287	-	-
Rat Genome U34 Set	rc_AI011234_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22092101	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1355135	-	-