Tgfb1
Genomic Map
Back To TopAssay Details
| Gene Symbol: Tgfb1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_021578.2 | NP_067589.1 | 6 - 7 | 1154 | 75 | |
| GenBank mRNA | AY550025.1 | - | 6 - 7 | 1009 | 75 | |
| BC076380.1 | - | 6 - 7 | 1154 | 7107411 | 75 | |
| X52498.1 | - | 6 - 7 | 1421 | 75 | ||
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Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0100008028.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
3' Most
Mammalian Gene Collection
Detect Genomic DNA
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
protein import into nucleus, translocation
negative regulation of transcription from RNA polymerase II promoter
MAPK cascade
regulation of cell growth
ureteric bud development
response to hypoxia
morphogenesis of a branching structure
cell activation
epithelial to mesenchymal transition
negative regulation of protein phosphorylation
positive regulation of protein phosphorylation
regulation of sodium ion transport
chondrocyte differentiation
hematopoietic progenitor cell differentiation
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains
tolerance induction to self antigen
protein phosphorylation
protein export from nucleus
ATP biosynthetic process
phosphate-containing compound metabolic process
cellular calcium ion homeostasis
inflammatory response
cell cycle arrest
mitotic cell cycle checkpoint
epidermal growth factor receptor signaling pathway
transforming growth factor beta receptor signaling pathway
common-partner SMAD protein phosphorylation
SMAD protein complex assembly
SMAD protein import into nucleus
negative regulation of neuroblast proliferation
salivary gland morphogenesis
endoderm development
female pregnancy
aging
negative regulation of DNA replication
cell proliferation
positive regulation of cell proliferation
negative regulation of cell proliferation
germ cell migration
response to radiation
response to wounding
response to glucose
defense response to fungus, incompatible interaction
response to organic substance
positive regulation of gene expression
negative regulation of gene expression
positive regulation of epithelial to mesenchymal transition
positive regulation of fibroblast migration
positive regulation of peptidyl-threonine phosphorylation
positive regulation of pathway-restricted SMAD protein phosphorylation
negative regulation of macrophage cytokine production
response to organic cyclic compound
cell growth
regulation of striated muscle tissue development
regulation of transforming growth factor beta receptor signaling pathway
evasion or tolerance of host defenses by virus
negative regulation of cell-cell adhesion
hyaluronan catabolic process
T cell differentiation
negative regulation of ossification
negative regulation of cell growth
lung development
positive regulation of cell migration
positive regulation of bone mineralization
mammary gland development
positive regulation of histone deacetylation
organ regeneration
positive regulation of protein complex assembly
positive regulation of exit from mitosis
lipopolysaccharide-mediated signaling pathway
positive regulation of cellular protein metabolic process
response to estradiol
response to progesterone
positive regulation of interleukin-17 production
receptor catabolic process
positive regulation of superoxide anion generation
mononuclear cell proliferation
positive regulation of collagen biosynthetic process
positive regulation of peptidyl-serine phosphorylation
response to vitamin D
response to laminar fluid shear stress
positive regulation of histone acetylation
positive regulation of protein dephosphorylation
wound healing
T cell activation
regulation of cell proliferation
negative regulation of T cell proliferation
regulation of protein import into nucleus
positive regulation of protein import into nucleus
positive regulation of odontogenesis
response to drug
myelination
myeloid dendritic cell differentiation
T cell homeostasis
positive regulation of apoptotic process
positive regulation of MAP kinase activity
regulation of MAPK cascade
protein kinase B signaling
positive regulation of blood vessel endothelial cell migration
negative regulation of blood vessel endothelial cell migration
positive regulation of phosphatidylinositol 3-kinase activity
ossification involved in bone remodeling
regulatory T cell differentiation
cell-cell junction organization
negative regulation of fat cell differentiation
negative regulation of myoblast differentiation
negative regulation of cell cycle
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
negative regulation of mitotic cell cycle
positive regulation of transcription from RNA polymerase II promoter
positive regulation of isotype switching to IgA isotypes
lymph node development
digestive tract development
negative regulation of skeletal muscle tissue development
inner ear development
positive regulation of epithelial cell proliferation
negative regulation of epithelial cell proliferation
positive regulation of protein secretion
negative regulation of phagocytosis
negative regulation of immune response
negative regulation of T cell activation
positive regulation of chemotaxis
positive regulation of NF-kappaB transcription factor activity
regulation of binding
regulation of DNA binding
positive regulation of smooth muscle cell differentiation
negative regulation of release of sequestered calcium ion into cytosol
positive regulation of protein kinase B signaling
face morphogenesis
frontal suture morphogenesis
pathway-restricted SMAD protein phosphorylation
positive regulation of SMAD protein import into nucleus
SMAD protein signal transduction
mammary gland branching involved in thelarche
branch elongation involved in mammary gland duct branching
regulation of branching involved in mammary gland duct morphogenesis
negative regulation of gene silencing by miRNA
regulation of cartilage development
lens fiber cell differentiation
response to cholesterol
positive regulation of cell cycle arrest
cellular response to growth factor stimulus
cellular response to organic cyclic compound
cellular response to dexamethasone stimulus
cellular response to transforming growth factor beta stimulus
extracellular matrix assembly
positive regulation of branching involved in ureteric bud morphogenesis
extrinsic apoptotic signaling pathway
negative regulation of hyaluronan biosynthetic process
positive regulation of protein localization to nucleus
positive regulation of NAD+ ADP-ribosyltransferase activity
regulation of actin cytoskeleton reorganization
regulation of miRNA metabolic process
positive regulation of transcription regulatory region DNA binding
glycoprotein binding
antigen binding
type II transforming growth factor beta receptor binding
cytokine activity
transforming growth factor beta receptor binding
growth factor activity
enzyme binding
type I transforming growth factor beta receptor binding
type III transforming growth factor beta receptor binding
protein homodimerization activity
protein heterodimerization activity
protein N-terminus binding
protein import into nucleus, translocation
negative regulation of transcription from RNA polymerase II promoter
MAPK cascade
regulation of cell growth
ureteric bud development
response to hypoxia
morphogenesis of a branching structure
cell activation
epithelial to mesenchymal transition
negative regulation of protein phosphorylation
positive regulation of protein phosphorylation
regulation of sodium ion transport
chondrocyte differentiation
hematopoietic progenitor cell differentiation
adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains
tolerance induction to self antigen
protein phosphorylation
protein export from nucleus
ATP biosynthetic process
phosphate-containing compound metabolic process
cellular calcium ion homeostasis
inflammatory response
cell cycle arrest
mitotic cell cycle checkpoint
epidermal growth factor receptor signaling pathway
transforming growth factor beta receptor signaling pathway
common-partner SMAD protein phosphorylation
SMAD protein complex assembly
SMAD protein import into nucleus
negative regulation of neuroblast proliferation
salivary gland morphogenesis
endoderm development
female pregnancy
aging
negative regulation of DNA replication
cell proliferation
positive regulation of cell proliferation
negative regulation of cell proliferation
germ cell migration
response to radiation
response to wounding
response to glucose
defense response to fungus, incompatible interaction
response to organic substance
positive regulation of gene expression
negative regulation of gene expression
positive regulation of epithelial to mesenchymal transition
positive regulation of fibroblast migration
positive regulation of peptidyl-threonine phosphorylation
positive regulation of pathway-restricted SMAD protein phosphorylation
negative regulation of macrophage cytokine production
response to organic cyclic compound
cell growth
regulation of striated muscle tissue development
regulation of transforming growth factor beta receptor signaling pathway
evasion or tolerance of host defenses by virus
negative regulation of cell-cell adhesion
hyaluronan catabolic process
T cell differentiation
negative regulation of ossification
negative regulation of cell growth
lung development
positive regulation of cell migration
positive regulation of bone mineralization
mammary gland development
positive regulation of histone deacetylation
organ regeneration
positive regulation of protein complex assembly
positive regulation of exit from mitosis
lipopolysaccharide-mediated signaling pathway
positive regulation of cellular protein metabolic process
response to estradiol
response to progesterone
positive regulation of interleukin-17 production
receptor catabolic process
positive regulation of superoxide anion generation
mononuclear cell proliferation
positive regulation of collagen biosynthetic process
positive regulation of peptidyl-serine phosphorylation
response to vitamin D
response to laminar fluid shear stress
positive regulation of histone acetylation
positive regulation of protein dephosphorylation
wound healing
T cell activation
regulation of cell proliferation
negative regulation of T cell proliferation
regulation of protein import into nucleus
positive regulation of protein import into nucleus
positive regulation of odontogenesis
response to drug
myelination
myeloid dendritic cell differentiation
T cell homeostasis
positive regulation of apoptotic process
positive regulation of MAP kinase activity
regulation of MAPK cascade
protein kinase B signaling
positive regulation of blood vessel endothelial cell migration
negative regulation of blood vessel endothelial cell migration
positive regulation of phosphatidylinositol 3-kinase activity
ossification involved in bone remodeling
regulatory T cell differentiation
cell-cell junction organization
negative regulation of fat cell differentiation
negative regulation of myoblast differentiation
negative regulation of cell cycle
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
negative regulation of mitotic cell cycle
positive regulation of transcription from RNA polymerase II promoter
positive regulation of isotype switching to IgA isotypes
lymph node development
digestive tract development
negative regulation of skeletal muscle tissue development
inner ear development
positive regulation of epithelial cell proliferation
negative regulation of epithelial cell proliferation
positive regulation of protein secretion
negative regulation of phagocytosis
negative regulation of immune response
negative regulation of T cell activation
positive regulation of chemotaxis
positive regulation of NF-kappaB transcription factor activity
regulation of binding
regulation of DNA binding
positive regulation of smooth muscle cell differentiation
negative regulation of release of sequestered calcium ion into cytosol
positive regulation of protein kinase B signaling
face morphogenesis
frontal suture morphogenesis
pathway-restricted SMAD protein phosphorylation
positive regulation of SMAD protein import into nucleus
SMAD protein signal transduction
mammary gland branching involved in thelarche
branch elongation involved in mammary gland duct branching
regulation of branching involved in mammary gland duct morphogenesis
negative regulation of gene silencing by miRNA
regulation of cartilage development
lens fiber cell differentiation
response to cholesterol
positive regulation of cell cycle arrest
cellular response to growth factor stimulus
cellular response to organic cyclic compound
cellular response to dexamethasone stimulus
cellular response to transforming growth factor beta stimulus
extracellular matrix assembly
positive regulation of branching involved in ureteric bud morphogenesis
extrinsic apoptotic signaling pathway
negative regulation of hyaluronan biosynthetic process
positive regulation of protein localization to nucleus
positive regulation of NAD+ ADP-ribosyltransferase activity
regulation of actin cytoskeleton reorganization
regulation of miRNA metabolic process
positive regulation of transcription regulatory region DNA binding
glycoprotein binding
antigen binding
type II transforming growth factor beta receptor binding
cytokine activity
transforming growth factor beta receptor binding
growth factor activity
enzyme binding
type I transforming growth factor beta receptor binding
type III transforming growth factor beta receptor binding
protein homodimerization activity
protein heterodimerization activity
protein N-terminus binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_42_P522899 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 418015 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 526079 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 932861 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 309651 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 471488 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 334237 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 703268 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 210701 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 742849 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 327158 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 654594 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 335135 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 494892 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 139677 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 127927 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_42_P522899 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_42_P522899 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_42_P522899 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_42_P522899 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 37497 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 52808 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10705219 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10705217 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10705215 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10705216 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10705222 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10705218 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10705221 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10705220 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10705213 | - | - |
| Rat Genome 230 2.0 Array | 1370082_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1370082_at | - | - |
| Affymetrix HT Rat Focus Array | 1370082_at | - | - |
| Affymetrix HT Rat Focus Array | 1370082_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0100065070.rn.1 | TC0100008028.rn.1 | RTA TC |
| Rat Expression Set 230 | 1370082_PM_at | - | - |
| Rat Expression Set 230 | 1370082_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10705213 | - | - |
| Rat Genome U34 Set | X52498cds_at | - | - |
| Rat Genome U34 Set | X52498cds_at | - | - |
| Rat Genome U34 Set | X52498cds_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21682458 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1356448 | - | - |
| RatRef-12 Expression BeadChip | ILMN_51699 | - | - |
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