Rn01476460_m1

• Gene Symbol: Gapdhs
• Gene Name: glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
• Gene Aliases: Gapds, gapdh-2
• Chromosome Location: Chr.1: 89180063 - 89195345 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Gapdhs
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_023964.1	NP_076454.1	9 - 10	1131		94
	XM_006228790.2	XP_006228852.1	9 - 10	1501		94
	XM_006228791.2	XP_006228853.1	9 - 10	1362		94
GenBank mRNA	AJ297631.1	-	9 - 10	1131		94
	BC161847.1	-	9 - 10	1153	7112898	94

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100008115.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Rattus norvegicus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Gapdhs

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Process(es)

glucose metabolic process
glycolytic process
spermatid development
sperm motility
oxidation-reduction process

Function(s)

molecular_function
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NADP binding
NAD binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P116261	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	643219	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	924184	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	79674	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	413439	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	430829	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	908861	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	917873	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	686457	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	421486	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	789409	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	223133	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	109119	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	21377	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P116261	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P116261	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P116261	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P116261	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700485123	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	47305	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	72606	-	-
Agilent Rat cDNA Microarray (G4105A)	700485123	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10720779	-	-
Affymetrix Rat Gene 1.0 ST Array	10720786	-	-
Affymetrix Rat Gene 1.0 ST Array	10720788	-	-
Affymetrix Rat Gene 1.0 ST Array	10720785	-	-
Affymetrix Rat Gene 1.0 ST Array	10720783	-	-
Affymetrix Rat Gene 1.0 ST Array	10720782	-	-
Affymetrix Rat Gene 1.0 ST Array	10720787	-	-
Affymetrix Rat Gene 1.0 ST Array	10720780	-	-
Affymetrix Rat Gene 1.0 ST Array	10720778	-	-
Affymetrix Rat Gene 1.0 ST Array	10720781	-	-
Affymetrix Rat Gene 1.0 ST Array	10720784	-	-
Affymetrix Rat Gene 1.1 ST Array	10720777	-	-
Rat Genome 230 2.0 Array	1369510_at	-	-
Rat Genome 230 2.0 Array	1369510_PM_at	-	-
Affymetrix HT Rat Focus Array	1369510_at	-	-
Affymetrix HT Rat Focus Array	1369510_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100066576.rn.1	TC0100008115.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100066575.rn.1	TC0100008115.rn.1	RTA TC
Rat Expression Set 230	1369510_PM_at	-	-
Rat Expression Set 230	1369510_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10720777	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20959599	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1357427	-	-
RatRef-12 Expression BeadChip	ILMN_51595	-	-