Rn01476862_m1

• Gene Symbol: Tph1
• Gene Name: tryptophan hydroxylase 1
• Gene Aliases: Tph
• Chromosome Location: Chr.1: 102669868 - 102699442 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tph1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001100634.2	NP_001094104.1	11 - 12	1280		69
	XM_006229218.2	XP_006229280.1	10 - 11	1406		69
	XM_006229219.1	XP_006229281.1	11 - 12	1319		69
GenBank mRNA	CB609064.1	-	4 - 5	395		69
	X53501.1	-	11 - 12	1280		69

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100005427.rn.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

serotonin biosynthetic process from tryptophan
circadian rhythm
negative regulation of ossification
response to immobilization stress
positive regulation of fat cell differentiation
bone remodeling
oxidation-reduction process
mammary gland alveolus development

Function(s)

tryptophan 5-monooxygenase activity
iron ion binding
amino acid binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P306204	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P048210	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	869370	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	305901	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	897982	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	219389	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	232641	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	764642	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	907767	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	873725	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	600232	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	735215	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	765850	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	253840	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	770478	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	39262	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	366894	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	46998	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	130614	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	590939	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	127824	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	49128	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	30263	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P048210	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P306204	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P048210	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P306204	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P306204	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P048210	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P306204	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P414484	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700493878	-	-
Agilent Rat cDNA Microarray (G4105A)	700493878	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10722109	-	-
Affymetrix Rat Gene 1.0 ST Array	10722101	-	-
Affymetrix Rat Gene 1.0 ST Array	10722105	-	-
Affymetrix Rat Gene 1.0 ST Array	10722103	-	-
Affymetrix Rat Gene 1.0 ST Array	10722107	-	-
Affymetrix Rat Gene 1.0 ST Array	10722100	-	-
Affymetrix Rat Gene 1.0 ST Array	10722099	-	-
Affymetrix Rat Gene 1.0 ST Array	10722102	-	-
Affymetrix Rat Gene 1.0 ST Array	10722108	-	-
Affymetrix Rat Gene 1.0 ST Array	10722104	-	-
Affymetrix Rat Gene 1.0 ST Array	10722106	-	-
Affymetrix Rat Gene 1.1 ST Array	10722097	-	-
Affymetrix Rat Clariom S Assay	PSR0100044489.rn.1	TC0100005427.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100044491.rn.1	TC0100005427.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100044492.rn.1	TC0100005427.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100044493.rn.1	TC0100005427.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100044490.rn.1	TC0100005427.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10722097	-	-
Rat Genome U34 Set	X53501cds_at	-	-
Rat Genome U34 Set	X53501cds_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22321062	-	-