Rn01480687_g1

• Gene Symbol: Usp30
• Gene Name: ubiquitin specific peptidase 30
• Gene Aliases: -
• Chromosome Location: Chr.12: 48262660 - 48286360 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Usp30
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001107153.1	NP_001100623.1	12 - 13	1410		138
	XM_008769337.1	XP_008767559.1	12 - 13	1415		138

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200001787.rn.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Detect Genomic DNA, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

cysteine protease, protease, protein modifying enzyme

Gene Ontology Categories:

Process(es)

mitophagy
proteolysis
mitochondrial fusion
protein deubiquitination
proteasome-mediated ubiquitin-dependent protein catabolic process
regulation of proteasomal protein catabolic process

Function(s)

cysteine-type endopeptidase activity
thiol-dependent ubiquitin-specific protease activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P530071	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	15708	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	64538	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	239145	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	901239	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	456287	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	751788	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	284839	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	480929	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	404297	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	321761	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	913029	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	927176	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	563060	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	172575	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	690359	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	249262	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	623124	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	723055	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	150935	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	45858	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	157960	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P530071	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P530071	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P530071	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P498990	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	26046	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	37734	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	30246	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10762868	-	-
Affymetrix Rat Gene 1.0 ST Array	10762869	-	-
Affymetrix Rat Gene 1.0 ST Array	10762865	-	-
Affymetrix Rat Gene 1.0 ST Array	10762860	-	-
Affymetrix Rat Gene 1.0 ST Array	10762863	-	-
Affymetrix Rat Gene 1.0 ST Array	10762864	-	-
Affymetrix Rat Gene 1.0 ST Array	10762862	-	-
Affymetrix Rat Gene 1.0 ST Array	10762859	-	-
Affymetrix Rat Gene 1.0 ST Array	10762870	-	-
Affymetrix Rat Gene 1.0 ST Array	10762866	-	-
Affymetrix Rat Gene 1.0 ST Array	10762861	-	-
Affymetrix Rat Gene 1.0 ST Array	10762867	-	-
Affymetrix Rat Gene 1.0 ST Array	10762858	-	-
Affymetrix Rat Gene 1.1 ST Array	10762857	-	-
Rat Genome 230 2.0 Array	1372570_PM_at	-	-
Rat Genome 230 2.0 Array	1395360_PM_at	-	-
Rat Genome 230 2.0 Array	1372570_at	-	-
Rat Genome 230 2.0 Array	1395360_at	-	-
Affymetrix HT Rat Focus Array	1372570_PM_at	-	-
Affymetrix HT Rat Focus Array	1372570_at	-	-
Affymetrix HT Rat Focus Array	1395360_at	-	-
Affymetrix HT Rat Focus Array	1395360_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1200015376.rn.1	TC1200001787.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200015372.rn.1	TC1200001787.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200015374.rn.1	TC1200001787.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200015373.rn.1	TC1200001787.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200015377.rn.1	TC1200001787.rn.1	RTA TC
Rat Expression Set 230	1372570_PM_at	-	-
Rat Expression Set 230	1372570_at	-	-
Rat Expression Set 230	1395360_at	-	-
Rat Expression Set 230	1395360_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10762857	-	-
Rat Genome U34 Set	rc_AA996777_s_at	-	-
Rat Genome U34 Set	rc_AI145892_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22117376	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1355480	-	-