Rn01480766_g1

Gene Symbol:

Ncf1 LOC100912379

Gene Name:

neutrophil cytosolic factor 1

neutrophil cytosol factor 1-like

Gene Aliases:

Ncf-1, p47phox

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Chromosome Location:

Chr.12: 25497104 - 25506300 on Build Rnor_6.0

Chromosome Location:

Chr.12: 28976528 - 28978633 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: Ncf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053734.2	NP_446186.2	10 - 11	1063		110
GenBank mRNA	AF547392.1	-	10 - 11	1063		110
	AF547393.1	-	10 - 11	1063		110
	AY029167.1	-	10 - 11	1063		110
	BC061810.1	-	10 - 11	1063		110

Gene Symbol: LOC100912379
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008769176.1	XP_008767398.1	3 - 4	516		110

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200000452.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ncf1
Click here to find siRNAs for Gene LOC100912379

Gene Ontology Categories:

Process(es)

response to yeast
leukocyte mediated cytotoxicity
respiratory burst involved in defense response
protein targeting to membrane
leukotriene metabolic process
apoptotic process
inflammatory response
cellular defense response
cell population proliferation
response to bacterium
superoxide anion generation
defense response to bacterium
respiratory burst
negative regulation of smooth muscle contraction
hydrogen peroxide biosynthetic process
defense response to Gram-positive bacterium
defense response to fungus
neutrophil-mediated killing of gram-positive bacterium
neutrophil-mediated killing of fungus

Function(s)

superoxide-generating NAD(P)H oxidase activity
SH3 domain binding
phosphatidylinositol binding
phosphatidylinositol-3,4-bisphosphate binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P051322	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	938649	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	638987	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	778560	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	57790	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	143203	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P051322	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P051322	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P051322	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P298049	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	58604	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	10707	-	-
Agilent Rat cDNA Microarray (G4105A)	701469622	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10757910	-	-
Affymetrix Rat Gene 1.0 ST Array	10757904	-	-
Affymetrix Rat Gene 1.0 ST Array	10757905	-	-
Affymetrix Rat Gene 1.0 ST Array	10757902	-	-
Affymetrix Rat Gene 1.0 ST Array	10757909	-	-
Affymetrix Rat Gene 1.0 ST Array	10757907	-	-
Affymetrix Rat Gene 1.0 ST Array	10757911	-	-
Affymetrix Rat Gene 1.0 ST Array	10757906	-	-
Affymetrix Rat Gene 1.0 ST Array	10757901	-	-
Affymetrix Rat Gene 1.0 ST Array	10757900	-	-
Affymetrix Rat Gene 1.0 ST Array	10757899	-	-
Affymetrix Rat Gene 1.0 ST Array	10757908	-	-
Affymetrix Rat Gene 1.1 ST Array	10757898	-	-
Rat Genome 230 2.0 Array	1387413_PM_at	-	-
Rat Genome 230 2.0 Array	1387413_at	-	-
Affymetrix HT Rat Focus Array	1387413_PM_at	-	-
Affymetrix HT Rat Focus Array	1387413_at	-	-
Affymetrix Rat Clariom S Assay	PSR1200004140.rn.1	TC1200000452.rn.1	RTA TC
Rat Expression Set 230	1387413_at	-	-
Rat Expression Set 230	1387413_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10757898	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21546613	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1355786	-	-
RatRef-12 Expression BeadChip	ILMN_62032	-	-