Rn01481081_g1 Best Coverage

• Gene Symbol: Rita1
• Gene Name: RBPJ interacting and tubulin associated 1
• Gene Aliases: RGD1306772, Rita
• Chromosome Location: Chr.12: 41485207 - 41488889 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rita1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001044226.1	NP_001037691.1	3 - 4	701		86
	XM_006249383.2	XP_006249445.1	3 - 4	804		86
	XM_006249384.2	XP_006249446.1	2 - 3	679		86
GenBank mRNA	BC112384.1	-	3 - 4	701		86

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200000683.rn.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

Notch signaling pathway
neurogenesis
negative regulation of Notch signaling pathway
nuclear export

Function(s)

tubulin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P17480	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	108792	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	221847	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P17480	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P17480	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P17480	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P17128	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	91314	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10758806	-	-
Affymetrix Rat Gene 1.0 ST Array	10758804	-	-
Affymetrix Rat Gene 1.0 ST Array	10758805	-	-
Affymetrix Rat Gene 1.0 ST Array	10758803	-	-
Affymetrix Rat Gene 1.0 ST Array	10758807	-	-
Affymetrix Rat Gene 1.1 ST Array	10758802	-	-
Rat Genome 230 2.0 Array	1386259_PM_a_at	-	-
Rat Genome 230 2.0 Array	1393223_a_at	-	-
Rat Genome 230 2.0 Array	1386259_a_at	-	-
Rat Genome 230 2.0 Array	1393223_PM_a_at	-	-
Affymetrix HT Rat Focus Array	1393223_a_at	-	-
Affymetrix HT Rat Focus Array	1386259_a_at	-	-
Affymetrix HT Rat Focus Array	1386259_PM_a_at	-	-
Affymetrix HT Rat Focus Array	1393223_PM_a_at	-	-
Affymetrix Rat Clariom S Assay	PSR1200006287.rn.1	TC1200000683.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200006290.rn.1	TC1200000683.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200006282.rn.1	TC1200000683.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200006284.rn.1	TC1200000683.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200006291.rn.1	TC1200000683.rn.1	RTA TC
Rat Expression Set 230	1386259_a_at	-	-
Rat Expression Set 230	1393223_a_at	-	-
Rat Expression Set 230	1393223_PM_a_at	-	-
Rat Expression Set 230	1386259_PM_a_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10758802	-	-
Rat Genome U34 Set	rc_AI104152_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20752838	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1368625	-	-