Rn01481826_g1 Best Coverage

• Gene Symbol: Cabp1
• Gene Name: calcium binding protein 1
• Gene Aliases: -
• Chromosome Location: Chr.12: 47185449 - 47209785 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cabp1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001033675.1	NP_001028847.1	4 - 5	337		98
	NM_001033676.1	NP_001028848.1	4 - 5	949		98
	NM_133529.2	NP_598213.1	5 - 6	517		98
GenBank mRNA	AJ315657.1	-	5 - 6	517		98
	AJ315761.1	-	4 - 5	337		98
	Y17048.2	-	4 - 5	949		98

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200000782.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cabp1

Gene Ontology Categories:

Process(es)

multicellular organism development
negative regulation of cell communication by electrical coupling
negative regulation of protein import into nucleus
regulation of synaptic plasticity
regulation of voltage-gated calcium channel activity
negative regulation of voltage-gated calcium channel activity

Function(s)

calcium ion binding
protein binding
nuclear localization sequence binding
protein domain specific binding
type 3 metabotropic glutamate receptor binding
protein homodimerization activity
ion channel binding
calcium-dependent protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P142922	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	765322	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	474503	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	153005	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	229676	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	520539	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	276559	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	829703	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	161645	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	23034	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	13207	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	749343	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	870512	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	152095	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	532414	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	869244	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	844353	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	616777	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	653388	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	431727	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	70261	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	150902	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	62816	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	30838	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P142922	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P142922	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P142922	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P524820	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	35718	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	60681	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	46012	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	50657	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10759011	-	-
Affymetrix Rat Gene 1.0 ST Array	10759017	-	-
Affymetrix Rat Gene 1.0 ST Array	10759012	-	-
Affymetrix Rat Gene 1.0 ST Array	10759015	-	-
Affymetrix Rat Gene 1.0 ST Array	10759013	-	-
Affymetrix Rat Gene 1.0 ST Array	10759016	-	-
Affymetrix Rat Gene 1.0 ST Array	10759014	-	-
Affymetrix Rat Gene 1.0 ST Array	10759010	-	-
Affymetrix Rat Gene 1.1 ST Array	10759009	-	-
Rat Genome 230 2.0 Array	1369886_PM_a_at	-	-
Rat Genome 230 2.0 Array	1396749_PM_at	-	-
Rat Genome 230 2.0 Array	1369886_a_at	-	-
Rat Genome 230 2.0 Array	1396749_at	-	-
Affymetrix HT Rat Focus Array	1396749_at	-	-
Affymetrix HT Rat Focus Array	1369886_a_at	-	-
Affymetrix HT Rat Focus Array	1369886_PM_a_at	-	-
Affymetrix HT Rat Focus Array	1396749_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1200006888.rn.1	TC1200000782.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200006890.rn.1	TC1200000782.rn.1	RTA TC
Rat Expression Set 230	1369886_PM_a_at	-	-
Rat Expression Set 230	1369886_a_at	-	-
Rat Expression Set 230	1396749_PM_at	-	-
Rat Expression Set 230	1396749_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10759009	-	-
Rat Genome U34 Set	Y17048_at	-	-
Rat Genome U34 Set	Y17048_g_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21666104	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1360836	-	-
RatRef-12 Expression BeadChip	ILMN_48596	-	-